RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 FAM72CH0Y354 149 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 PSMG1O95456 288 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 GSTA2P09210 222 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 DARSP14868 501 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 CCNG1P51959 295 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC25A52Q3SY17 297 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 FAM72AQ5TYM5 149 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SNX30Q5VWJ9 437 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 FAM72DQ6L9T8 149 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 C4orf22Q6V702 233 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 FAM72BQ86X60 149 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF567Q8N184 647 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SIX6OS1Q8N1H7 587 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 OR52K1Q8NGK4 314 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC7A14Q8TBB6 771 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SPDL1Q96EA4 605 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 OLFM3Q96PB7 478 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 EMCNQ9ULC0 261 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 TIMM13Q9Y5L4 95 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 WASF2Q9Y6W5 498 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 CCL15-CCL14A0A0B4J2E2 113 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 EEF2KO00418 725 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 PIRO00625 290 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 NVLO15381 856 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 FDFT1P37268 417 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ACADSBP45954 432 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 DEUP1Q05D60 604 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 CCL15Q16663 113 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 TSNAXIP1Q2TAA8 658 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 GPR142Q7Z601 462 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 HACE1Q8IYU2 909 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 CRYBG2Q8N1P7 616 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 AGR3Q8TD06 166 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 NRG4Q8WWG1 115 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 EMID1Q96A84 441 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 MAML3Q96JK9 1138 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZFP42Q96MM3 310 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 PIGVQ9NUD9 493 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 STOML1Q9UBI4 398 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SPECC1L-ADORA2AF8WAN1 911 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 TBX10O75333 385 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 LMNAP02545 664 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ITGA2BP08514 1039 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 TYK2P29597 1187 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 WSCD1Q658N2 575 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ALKAL1Q6UXT8 129 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 STRADAQ7RTN6 431 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 C10orf107Q8IVU9 208 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 RNF169Q8NCN4 708 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ARRDC4Q8NCT1 418 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 SHKBP1Q8TBC3 707 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ARNTL2Q8WYA1 636 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 ACSS2Q9NR19 701 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 PNPOQ9NVS9 261 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 LRRC42Q9Y546 428 aa16.12■□□□□ 0.17
ARHGEF40-203ENST00000554514 NEBLO76041 1014 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 CD4P01730 458 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 EPHX2P34913 555 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 SLC1A6P48664 564 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 VWA5B1Q5TIE3 1220 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 OTUD1Q5VV17 481 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 LRRC8BQ6P9F7 803 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 TNS4Q8IZW8 715 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 DNAAF3Q8N9W5 541 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 CFAP61Q8NHU2 1237 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF778Q96MU6 729 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 TINF2Q9BSI4 451 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 THAP1Q9NVV9 213 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 SNX10Q9Y5X0 201 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 RBM47A0AV96 593 aaKnown RBP16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 CAPN14A8MX76 684 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 TREHO43280 583 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 SNNO75324 88 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 PGAM1P18669 254 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 SMYD5Q6GMV2 418 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 NPLOC4Q8TAT6 608 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 ATP2A3Q93084 1043 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 ZNF669Q96BR6 464 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 TNIP3Q96KP6 325 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 FAM124BQ9H5Z6 455 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 BATF3Q9NR55 127 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 UBP1Q9NZI7 540 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 TAGLN3Q9UI15 199 aa16.11■□□□□ 0.17
ARHGEF40-203ENST00000554514 GOLGA8TH3BQL2 631 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 XPO1O14980 1071 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 ATP9BO43861 1147 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 LUC7L3O95232 432 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 IL1BP01584 269 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 TKTL1P51854 596 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 LILRA4P59901 499 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 WASHC5Q12768 1159 aa16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 TWF2Q6IBS0 349 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 MARK2Q7KZI7 788 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 SCG3Q8WXD2 468 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-203ENST00000554514 HSFY1Q96LI6 401 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms