RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CDC6Q99741 560 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 P2RY13Q9BPV8 354 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 EIF2AQ9BY44 585 aaKnown RBP6.16□□□□□ -1.42
ATXN3-226ENST00000554350 CSRNP2Q9H175 543 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 EBF3Q9H4W6 596 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 FBRSL1Q9HCM7 1045 aaKnown RBP6.16□□□□□ -1.42
ATXN3-226ENST00000554350 GKN1Q9NS71 199 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 MTRRQ9UBK8 725 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 STRIP2Q9ULQ0 834 aa6.16□□□□□ -1.42
ATXN3-226ENST00000554350 TIMM13Q9Y5L4 95 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-226ENST00000554350 BLACEA4D250 179 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 IPO5O00410 1097 aaKnown RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 DDX3XO00571 662 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 CBFA2T3O75081 653 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 MBD3O95983 291 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ITGAVP06756 1048 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 SRGAP2CP0DJJ0 459 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 XRCC6P12956 609 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF28P17035 718 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 P2RY2P41231 377 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 RPL11P62913 178 aaKnown RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ROR1Q01973 937 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 RUNX3Q13761 415 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 BYSLQ13895 437 aaKnown RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ARHGAP15Q53QZ3 475 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 GPR158Q5T848 1215 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 E4F1Q66K89 784 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 NAIF1Q69YI7 327 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 TRIM68Q6AZZ1 485 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ANKS3Q6ZW76 656 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF227Q86WZ6 799 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 PLA2G4DQ86XP0 818 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 LGI4Q8N135 537 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 LEMD2Q8NC56 503 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 RCBTB1Q8NDN9 531 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF461Q8TAF7 563 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 HMGB4Q8WW32 186 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 MBD6Q96DN6 1003 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 TMEM176AQ96HP8 235 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 CPB2Q96IY4 423 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 LRRC3BQ96PB8 259 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 SH2D3AQ9BRG2 576 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF577Q9BSK1 485 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 LSG1Q9H089 658 aaKnown RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 NXF3Q9H4D5 531 aaKnown RBP6.15□□□□□ -1.42
ATXN3-226ENST00000554350 CEP72Q9P209 647 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 TPCN1Q9ULQ1 816 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 GIT1Q9Y2X7 761 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 PCDHA10Q9Y5I2 948 aa6.15□□□□□ -1.42
ATXN3-226ENST00000554350 TNRC6BQ9UPQ9 1833 aaKnown RBP6.15□□□□□ -1.43
ATXN3-226ENST00000554350 MGAQ8IWI9 3026 aa6.15□□□□□ -1.43
ATXN3-226ENST00000554350 LRRK2Q5S007 2527 aa6.15□□□□□ -1.43
ATXN3-226ENST00000554350 KNTC1P50748 2209 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 B2RBV5 119 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 AKAP8O43823 692 aaKnown RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 GJB3O75712 270 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 SEC24AO95486 1093 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 PRAMEF12O95522 483 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 LCP1P13796 627 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 TKTP29401 623 aaKnown RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 HOXA11P31270 313 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 ACTN2P35609 894 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 UCNP55089 124 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 CLDN6P56747 220 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 PTH1RQ03431 593 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 ZNF33AQ06730 810 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 NCBP1Q09161 790 aaKnown RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 GRIK2Q13002 908 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 TUSC3Q13454 348 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 SMAD1Q15797 465 aaKnown RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 PRSS53Q2L4Q9 553 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 MCMDC2Q4G0Z9 681 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 C6orf15Q6UXA7 325 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 LIMS2Q7Z4I7 341 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 ZC3H18Q86VM9 953 aaKnown RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 RASSF3Q86WH2 238 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 SMAP1Q8IYB5 467 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 DIO2Q92813 273 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 MRRFQ96E11 262 aaKnown RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 C1orf159Q96HA4 380 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 POLR3CQ9BUI4 534 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 TGIF2Q9GZN2 237 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 GRPEL1Q9HAV7 217 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 HELLSQ9NRZ9 838 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 LMBRD1Q9NUN5 540 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 HSPBP1Q9NZL4 362 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-226ENST00000554350 PCDH15Q96QU1 1955 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 ATMQ13315 3056 aa6.14□□□□□ -1.43
ATXN3-226ENST00000554350 FBN2P35556 2912 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 A0A0D9SFI3 127 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 ERICH2A1L162 156 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 TMEM150BA6NC51 233 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 I3L4J1 428 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 CHMP2AO43633 222 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 BRINP1O60477 761 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 NPTXRO95502 500 aa6.13□□□□□ -1.43
ATXN3-226ENST00000554350 AFPP02771 609 aaKnown RBP6.13□□□□□ -1.43
ATXN3-226ENST00000554350 NAT2P11245 290 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms