RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 PAGE1O75459 146 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 SERPING1P05155 500 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 RRM1P23921 792 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 RDXP35241 583 aaKnown RBP24.07■■□□□ 1.44
NEK9-203ENST00000553945 RFC1P35251 1148 aaPredicted RBP24.07■■□□□ 1.44
NEK9-203ENST00000553945 WASP42768 502 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 CDO1Q16878 200 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 C15orf59Q2T9L4 293 aaPredicted RBP24.07■■□□□ 1.44
NEK9-203ENST00000553945 CCDC14Q49A88 953 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 DNAAF5Q86Y56 855 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 MFN1Q8IWA4 741 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 CCDC117Q8IWD4 279 aaPredicted RBP24.07■■□□□ 1.44
NEK9-203ENST00000553945 CARNMT1Q8N4J0 409 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 ZBTB44Q8NCP5 570 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 VCPIP1Q96JH7 1222 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 PRMT1Q99873 361 aaKnown RBP24.07■■□□□ 1.44
NEK9-203ENST00000553945 SIK2Q9H0K1 926 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 RBSNQ9H1K0 784 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 ABCB8Q9NUT2 735 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 TMEM51Q9NW97 253 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 ARHGEF38Q9NXL2 777 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 HS3ST4Q9Y661 456 aa24.07■■□□□ 1.44
NEK9-203ENST00000553945 CACNA1HO95180 2353 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 APBB3O95704 486 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 FTLP02792 175 aaPredicted RBP24.06■■□□□ 1.44
NEK9-203ENST00000553945 GZMAP12544 262 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 HLA-FP30511 346 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 HOXA6P31267 233 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 GGCXP38435 758 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 AUHQ13825 339 aaKnown RBP24.06■■□□□ 1.44
NEK9-203ENST00000553945 TRIM14Q14142 442 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 RNF43Q68DV7 783 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 BNIPLQ7Z465 357 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 VSTM4Q8IW00 320 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 CHPFQ8IZ52 775 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 CAMKK1Q8N5S9 505 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 WFDC5Q8TCV5 224 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 ACOX2Q99424 681 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.06■■□□□ 1.44
NEK9-203ENST00000553945 CIPCQ9C0C6 399 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 ANLNQ9NQW6 1124 aa24.06■■□□□ 1.44
NEK9-203ENST00000553945 FANCMQ8IYD8 2048 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 TCRBV5S1A1TA0A578 114 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 ANKRD62A6NC57 917 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 ADAM23O75077 832 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 RTN2O75298 545 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 GPD1P21695 349 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 NTSR1P30989 418 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 PTPN9P43378 593 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 CDH18Q13634 790 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 CRY1Q16526 586 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 RABGAP1LQ5R372 815 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 SH3PXD2AQ5TCZ1 1133 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 SDE2Q6IQ49 451 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 WDR59Q6PJI9 974 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 TMEM92Q6UXU6 159 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 VPS36Q86VN1 386 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 LONP2Q86WA8 852 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 FAM131BQ86XD5 332 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 ZNF557Q8N988 423 aaPredicted RBP24.05■■□□□ 1.44
NEK9-203ENST00000553945 TSTD1Q8NFU3 115 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 WFIKKN2Q8TEU8 576 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 UCMAQ8WVF2 138 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 RPRD1AQ96P16 312 aaPredicted RBP24.05■■□□□ 1.44
NEK9-203ENST00000553945 MCEEQ96PE7 176 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 ELOVL2Q9NXB9 296 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 GGA2Q9UJY4 613 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 VANGL2Q9ULK5 521 aa24.05■■□□□ 1.44
NEK9-203ENST00000553945 PROB1E7EW31 1015 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 H0Y626 953 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 AP5Z1O43299 807 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 ENDOD1O94919 500 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 LUC7L3O95232 432 aaKnown RBP24.04■■□□□ 1.44
NEK9-203ENST00000553945 PLEKP08567 350 aaPredicted RBP24.04■■□□□ 1.44
NEK9-203ENST00000553945 TPM1P09493 284 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 PABPC1P11940 636 aaKnown RBP24.04■■□□□ 1.44
NEK9-203ENST00000553945 HNRNPLP14866 589 aaKnown RBP eCLIP24.04■■□□□ 1.44
NEK9-203ENST00000553945 CD70P32970 193 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 DGKEP52429 567 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 EIF4HQ15056 248 aaKnown RBP24.04■■□□□ 1.44
NEK9-203ENST00000553945 RAB6CQ53S08 254 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 PPP1R15BQ5SWA1 713 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 TMEM215Q68D42 235 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 FBXL22Q6P050 247 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 DCUN1D2Q6PH85 259 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 SARM1Q6SZW1 724 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 CHST9Q7L1S5 443 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 WDR5BQ86VZ2 330 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 CIR1Q86X95 450 aaPredicted RBP24.04■■□□□ 1.44
NEK9-203ENST00000553945 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.04■■□□□ 1.44
NEK9-203ENST00000553945 FIBINQ8TAL6 211 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 NKD2Q969F2 451 aaPredicted RBP24.04■■□□□ 1.44
NEK9-203ENST00000553945 TRIM5Q9C035 493 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 RAB6CQ9H0N0 254 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 TMPRSS4Q9NRS4 437 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 PARVAQ9NVD7 372 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 CACNA2D2Q9NY47 1150 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 ADAMTS1Q9UHI8 967 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 SNX10Q9Y5X0 201 aa24.04■■□□□ 1.44
NEK9-203ENST00000553945 I6L893 689 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms