RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 DDX56Q9NY93 547 aaKnown RBP15.04■□□□□ -0
SHMT2-208ENST00000553868 USP3Q9Y6I4 520 aa15.04■□□□□ -0
SHMT2-208ENST00000553868 TNFRSF10BO14763 440 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 GRAP2O75791 330 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 RPP40O75818 363 aaKnown RBP15.03■□□□□ -0
SHMT2-208ENST00000553868 ABLIM3O94929 683 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 SLU7O95391 586 aaKnown RBP15.03■□□□□ -0
SHMT2-208ENST00000553868 LTFP02788 710 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 USP17L7P0C7H9 530 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 ATF2P15336 505 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 CXCR5P32302 372 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 FLT3P36888 993 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 SOX9P48436 509 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 CDR1P51861 262 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 TUBB4BP68371 445 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 DUSP4Q13115 394 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 GPRIN1Q7Z2K8 1008 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 POLNQ7Z5Q5 900 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 PROSER1Q86XN7 944 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 DEFB124Q8NES8 71 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 CLEC4CQ8WTT0 213 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 GAB3Q8WWW8 586 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 PIWIL1Q96J94 861 aaKnown RBP15.03■□□□□ -0
SHMT2-208ENST00000553868 SLC2A13Q96QE2 648 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 TRMT61BQ9BVS5 477 aaKnown RBP15.03■□□□□ -0
SHMT2-208ENST00000553868 VPS45Q9NRW7 570 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 NEUROG3Q9Y4Z2 214 aa15.03■□□□□ -0
SHMT2-208ENST00000553868 EML5Q05BV3 1969 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 RIOK3O14730 519 aaKnown RBP15.02■□□□□ -0
SHMT2-208ENST00000553868 CEP104O60308 925 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 SRGAP2O75044 1071 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 RHOP08100 348 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 HOXA9P31269 272 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 PEX5P50542 639 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 PLD1Q13393 1074 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 VEPH1Q14D04 833 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 TAF5Q15542 800 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 DDR2Q16832 855 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 SLC25A52Q3SY17 297 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 CCDC14Q49A88 953 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 ZFYVE27Q5T4F4 411 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 VITQ6UXI7 678 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 DENND5BQ6ZUT9 1274 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 STRADAQ7RTN6 431 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 KATNAL2Q8IYT4 538 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 DEFB106AQ8N104 65 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 IRF7Q92985 503 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 RBM41Q96IZ5 413 aaKnown RBP15.02■□□□□ -0
SHMT2-208ENST00000553868 CAPZA3Q96KX2 299 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 GDE1Q9NZC3 331 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 SCML2Q9UQR0 700 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 SLC27A5Q9Y2P5 690 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 MSRB2Q9Y3D2 182 aa15.02■□□□□ -0
SHMT2-208ENST00000553868 CACNA1EQ15878 2313 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CTAGE15A4D2H0 777 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 YJEFN3A6XGL0 299 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 E7ENQ6 273 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 PGRMC1O00264 195 aaKnown RBP15.01□□□□□ -0.01
SHMT2-208ENST00000553868 PRRG1O14668 218 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 PRPSAP2O60256 369 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 LRCH4O75427 683 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 F9P00740 461 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CAPNS1P04632 268 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CTAGE8P0CG41 777 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CEACAM1P13688 526 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 YWHAQP27348 245 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 ALDH1A3P47895 512 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 PSEN1P49768 467 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 SULT1E1P49888 294 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 YWHAGP61981 247 aaKnown RBP eCLIP15.01□□□□□ -0.01
SHMT2-208ENST00000553868 DCAF6Q58WW2 860 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 DAB2IPQ5VWQ8 1189 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CTAGE6Q86UF2 777 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 MON1AQ86VX9 555 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CREG2Q8IUH2 290 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CTAGE4Q8IX94 777 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 RCOR2Q8IZ40 523 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 EXD1Q8NHP7 514 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 ACTRT1Q8TDG2 376 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 COG1Q8WTW3 980 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 FAM172AQ8WUF8 416 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 ALG3Q92685 438 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 KRT35Q92764 455 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 TCEAL4Q96EI5 215 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CFAP57Q96MR6 1250 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CARD6Q9BX69 1037 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 CYP4F11Q9HBI6 524 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 ZFP14Q9HCL3 533 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 ABCC13Q9NSE7 274 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 IL37Q9NZH6 218 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 TTC7AQ9ULT0 858 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-208ENST00000553868 PCDHGA5Q9Y5G8 931 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 MYH10P35580 1976 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 ASXL3Q9C0F0 2248 aa15.01□□□□□ -0.01
SHMT2-208ENST00000553868 PTPRDP23468 1912 aa15□□□□□ -0.01
SHMT2-208ENST00000553868 LNP1A1A4G5 178 aa15□□□□□ -0.01
SHMT2-208ENST00000553868 EIF4E1BA6NMX2 242 aaKnown RBP15□□□□□ -0.01
SHMT2-208ENST00000553868 ZNF185O15231 689 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms