RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 MID1O15344 667 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 PHACTR2O75167 634 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 CLSTN1O94985 981 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 ADORA2BP29275 332 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 PSMD6Q15008 389 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 MBLAC2Q68D91 279 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 SCARA5Q6ZMJ2 495 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 CLEC20AQ6ZU45 233 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 KIAA0907Q7Z7F0 614 aaPredicted RBP14.42□□□□□ -0.1
PRPF39-204ENST00000553605 FAM217AQ8IXS0 508 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 ZC3H3Q8IXZ2 948 aaKnown RBP14.42□□□□□ -0.1
PRPF39-204ENST00000553605 SLC25A45Q8N413 288 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 ZSCAN31Q96LW9 406 aaPredicted RBP14.42□□□□□ -0.1
PRPF39-204ENST00000553605 SLC46A1Q96NT5 459 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 ABCG4Q9H172 646 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 OSBPL2Q9H1P3 480 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 VRTNQ9H8Y1 702 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 FAM49BQ9NUQ9 324 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 GGA2Q9UJY4 613 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 FZD4Q9ULV1 537 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 TPX2Q9ULW0 747 aaKnown RBP14.42□□□□□ -0.1
PRPF39-204ENST00000553605 SATB2Q9UPW6 733 aa14.42□□□□□ -0.1
PRPF39-204ENST00000553605 AHCTF1Q8WYP5 2266 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 A0A1B0GVM2 712 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 MAGEC1O60732 1142 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 PABPC1P11940 636 aaKnown RBP14.41□□□□□ -0.1
PRPF39-204ENST00000553605 CKMT1AP12532 417 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 POLR2EP19388 210 aaKnown RBP14.41□□□□□ -0.1
PRPF39-204ENST00000553605 KIF11P52732 1056 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 EHHADHQ08426 723 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 CST6Q15828 149 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 ZSCAN23Q3MJ62 389 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 ZNF667Q5HYK9 610 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 C3orf38Q5JPI3 329 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 NAPEPLDQ6IQ20 393 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 CCDC186Q7Z3E2 898 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 TMC6Q7Z403 805 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.41□□□□□ -0.1
PRPF39-204ENST00000553605 OR4C6Q8NH72 309 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 EPSTI1Q96J88 318 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 ARHGAP9Q9BRR9 750 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 PNPLA8Q9NP80 782 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 PANK4Q9NVE7 773 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 MARCH2Q9P0N8 246 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
PRPF39-204ENST00000553605 FLNCQ14315 2725 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 SLC12A8A0AV02 714 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 FRMD3A2A2Y4 597 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 SIN3BO75182 1162 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 ITGB6P18564 788 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 SLC8A1P32418 973 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 NDST1P52848 882 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 CYP24A1Q07973 514 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 CLN3Q13286 438 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 ISXQ2M1V0 245 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 ZNF699Q32M78 642 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 C4orf17Q53FE4 359 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 SND1Q7KZF4 910 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRPF39-204ENST00000553605 IQCHQ86VS3 1027 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 MMAAQ8IVH4 418 aaKnown RBP14.4□□□□□ -0.1
PRPF39-204ENST00000553605 OR14C36Q8NHC7 312 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 ELMO3Q96BJ8 720 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 TMA16Q96EY4 203 aaKnown RBP14.4□□□□□ -0.1
PRPF39-204ENST00000553605 CCNL2Q96S94 520 aaPredicted RBP14.4□□□□□ -0.1
PRPF39-204ENST00000553605 STRIP2Q9ULQ0 834 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 KIF3AQ9Y496 699 aa14.4□□□□□ -0.1
PRPF39-204ENST00000553605 TBC1D3DA0A087WVF3 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3IA0A087WXS9 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3EA0A087X179 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3KA0A087X1G2 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 A0A1W2PNU3 283 aaPredicted RBP14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3FA6NER0 549 aaPredicted RBP14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3LB9A6J9 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 EFSO43281 561 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 LATO43561 262 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 GP1BAP07359 652 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3HP0C7X1 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 DGKAP23743 735 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 ADPRHP54922 357 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 ST8SIA6P61647 398 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 OVGP1Q12889 678 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 SERINC3Q13530 473 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 RRAGBQ5VZM2 374 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3GQ6DHY5 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3CQ6IPX1 549 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 STXBP4Q6ZWJ1 553 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 PRPF39Q86UA1 669 aaKnown RBP14.39□□□□□ -0.11
PRPF39-204ENST00000553605 UNC93AQ86WB7 457 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 TBC1D3Q8IZP1 549 aaPredicted RBP14.39□□□□□ -0.11
PRPF39-204ENST00000553605 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
PRPF39-204ENST00000553605 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 USP3Q9Y6I4 520 aa14.39□□□□□ -0.11
PRPF39-204ENST00000553605 MYO9AB2RTY4 2548 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 CDRT15L2A8MXV6 281 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 FFAR2O15552 330 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 BMP15O95972 392 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 SFTPCP11686 197 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 GOT1P17174 413 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 CR2P20023 1033 aa14.38□□□□□ -0.11
PRPF39-204ENST00000553605 HOXD13P35453 343 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms