RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 HADHQ16836 314 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 BOLA3Q53S33 107 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 FYB2Q5VWT5 728 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 CWF19L1Q69YN2 538 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 WDR59Q6PJI9 974 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 SYT13Q7L8C5 426 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 SETD3Q86TU7 594 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 MFN1Q8IWA4 741 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 CCDC112Q8NEF3 446 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 RPRD1AQ96P16 312 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 MCEEQ96PE7 176 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 TBCBQ99426 244 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 EPAS1Q99814 870 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 FOXQ1Q9C009 403 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 TKTL2Q9H0I9 626 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 NHEJ1Q9H9Q4 299 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 POLMQ9NP87 494 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 C11orf16Q9NQ32 467 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 PPARGC1AQ9UBK2 798 aaKnown RBP10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 TICRRQ7Z2Z1 1910 aa10.62□□□□□ -0.71
TRAFD1-208ENST00000552890 SYNJ2BP-COX16A0A087WUM0 186 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 FAM86C2PA6NEL3 165 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 GOLGA6L3A6NEY3 463 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 TMEM191CA6NGB0 347 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 TMCO5BA8MYB1 307 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 FGF10O15520 208 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 TBL1XO60907 577 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 CYP1A2P05177 515 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 TMEM253P0C7T8 217 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 HNRNPLP14866 589 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 POLR2EP19388 210 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 PSMA2P25787 234 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 RFC1P35251 1148 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 ADRA1BP35368 520 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 FLT3P36888 993 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 EIF4A3P38919 411 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 OPRD1P41143 372 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 ATP11AP98196 1134 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 SCAPQ12770 1279 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 IFI16Q16666 785 aaKnown RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 RNF219Q5W0B1 726 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 RNF43Q68DV7 783 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 BNIPLQ7Z465 357 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 LGI2Q8N0V4 545 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 ST13P5Q8NFI4 369 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 RIN3Q8TB24 985 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 ADAM32Q8TC27 787 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 FAM172AQ8WUF8 416 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 CFAP57Q96MR6 1250 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 C2orf49Q9BVC5 232 aaPredicted RBP10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 CATSPERBQ9H7T0 1116 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 PRDM16Q9HAZ2 1276 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 PIGVQ9NUD9 493 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 COX16Q9P0S2 106 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 DLGAP2Q9P1A6 1054 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 ARHGAP20Q9P2F6 1191 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 SUN2Q9UH99 717 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 HPCAL4Q9UM19 191 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 PCDHGA2Q9Y5H1 932 aa10.61□□□□□ -0.71
TRAFD1-208ENST00000552890 MIA3Q5JRA6 1907 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 A0A087X0T9 212 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 OTOL1A6NHN0 477 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 SYNCRIPO60506 623 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 PAGE1O75459 146 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 DCNP07585 359 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 FAM228BP0C875 321 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 CD72P21854 359 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 HOXD9P28356 352 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 NTSR1P30989 418 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 L1CAMP32004 1257 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 SOX9P48436 509 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 VASPP50552 380 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 ADKP55263 362 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 SLC20A2Q08357 652 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 CCDC15Q0P6D6 951 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 AUHQ13825 339 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 CCDC14Q49A88 953 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 C5orf22Q49AR2 442 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 FAM133BQ5BKY9 247 aaKnown RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 FSTL4Q6MZW2 842 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 TXNDC11Q6PKC3 985 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 MAP7D3Q8IWC1 876 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 ZNF687Q8N1G0 1237 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 ZNF513Q8N8E2 541 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 NIPA2Q8N8Q9 360 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 ATRIPQ8WXE1 791 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 CCDC114Q96M63 670 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 ZYG11BQ9C0D3 744 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 HAUS2Q9NVX0 235 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 ELOVL2Q9NXB9 296 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 CTTNBP2NLQ9P2B4 639 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 OR12D3Q9UGF7 316 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 MMP17Q9ULZ9 603 aa10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
TRAFD1-208ENST00000552890 TRIOO75962 3097 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms