RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 TAF1BQ53T94 588 aaPredicted RBP8.85□□□□□ -0.99
CDK4-213ENST00000552713 ARHGAP40Q5TG30 622 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 SFMBT2Q5VUG0 894 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 MBLAC2Q68D91 279 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 ZNF776Q68DI1 518 aaPredicted RBP8.85□□□□□ -0.99
CDK4-213ENST00000552713 KDM7AQ6ZMT4 941 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 SV2AQ7L0J3 742 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 BHLHA9Q7RTU4 235 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 SPATS2Q86XZ4 545 aaKnown RBP8.85□□□□□ -0.99
CDK4-213ENST00000552713 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDK4-213ENST00000552713 FAM181AQ8N9Y4 354 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 DHX58Q96C10 678 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 DUSP16Q9BY84 665 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 RSPH9Q9H1X1 276 aaPredicted RBP8.85□□□□□ -0.99
CDK4-213ENST00000552713 NEUROG2Q9H2A3 272 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 BLZF1Q9H2G9 400 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 TNMDQ9H2S6 317 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 PABPC3Q9H361 631 aaKnown RBP8.85□□□□□ -0.99
CDK4-213ENST00000552713 PNPLA8Q9NP80 782 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 AASDHPPTQ9NRN7 309 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 FBXL12Q9NXK8 326 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 GGA2Q9UJY4 613 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 PLA2G4CQ9UP65 541 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 TRPM6Q9BX84 2022 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 PTPN13Q12923 2485 aa8.85□□□□□ -0.99
CDK4-213ENST00000552713 UBE4BO95155 1302 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 TULP2O00295 520 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 ARHGAP6O43182 974 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 SIN3BO75182 1162 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 DLDP09622 509 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 PABPC1P11940 636 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 CD58P19256 250 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 CD38P28907 300 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 ACTN2P35609 894 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 YWHAGP61981 247 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDK4-213ENST00000552713 SNRPFP62306 86 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 KNOP1Q1ED39 458 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 TTC31Q49AM3 519 aaPredicted RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 MPPE1Q53F39 396 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 CNNM4Q6P4Q7 775 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 RFWD3Q6PCD5 774 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 USP30Q70CQ3 517 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 RSRC2Q7L4I2 434 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 TADA2BQ86TJ2 420 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 DHX40Q8IX18 779 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 DCBLD1Q8N8Z6 715 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 GANCQ8TET4 914 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 WFIKKN2Q8TEU8 576 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 RFFLQ8WZ73 363 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 TTC9Q92623 222 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 MYEOVQ96EZ4 313 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 HIC2Q96JB3 615 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 LMLNQ96KR4 655 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 LGMNQ99538 433 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 C7orf25Q9BPX7 421 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDK4-213ENST00000552713 NT5C1AQ9BXI3 368 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 CLMPQ9H6B4 373 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 DMAC2Q9NW81 257 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 TFIP11Q9UBB9 837 aaKnown RBP8.84□□□□□ -0.99
CDK4-213ENST00000552713 SFMBT1Q9UHJ3 866 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 CLCA2Q9UQC9 943 aa8.84□□□□□ -0.99
CDK4-213ENST00000552713 AHCTF1Q8WYP5 2266 aa8.83□□□□□ -1
CDK4-213ENST00000552713 GOLGA6L7A0A1B0GV03 622 aa8.83□□□□□ -1
CDK4-213ENST00000552713 B8ZZF3 427 aa8.83□□□□□ -1
CDK4-213ENST00000552713 TRIM38O00635 465 aa8.83□□□□□ -1
CDK4-213ENST00000552713 MSI1O43347 362 aaKnown RBP8.83□□□□□ -1
CDK4-213ENST00000552713 STX6O43752 255 aa8.83□□□□□ -1
CDK4-213ENST00000552713 SDC3O75056 442 aa8.83□□□□□ -1
CDK4-213ENST00000552713 MT-CO3P00414 261 aa8.83□□□□□ -1
CDK4-213ENST00000552713 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
CDK4-213ENST00000552713 MPOP05164 745 aa8.83□□□□□ -1
CDK4-213ENST00000552713 CDK4P11802 303 aa8.83□□□□□ -1
CDK4-213ENST00000552713 P4HA1P13674 534 aa8.83□□□□□ -1
CDK4-213ENST00000552713 CKMT2P17540 419 aa8.83□□□□□ -1
CDK4-213ENST00000552713 SLC6A4P31645 630 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PIK3CAP42336 1068 aa8.83□□□□□ -1
CDK4-213ENST00000552713 METAP1P53582 386 aa8.83□□□□□ -1
CDK4-213ENST00000552713 AP3M2P53677 418 aa8.83□□□□□ -1
CDK4-213ENST00000552713 NXPH1P58417 271 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PPP2CBP62714 309 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PPP2CAP67775 309 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PDE4CQ08493 712 aa8.83□□□□□ -1
CDK4-213ENST00000552713 E2F5Q15329 346 aa8.83□□□□□ -1
CDK4-213ENST00000552713 CST6Q15828 149 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PROX2Q3B8N5 592 aa8.83□□□□□ -1
CDK4-213ENST00000552713 ZNF394Q53GI3 561 aa8.83□□□□□ -1
CDK4-213ENST00000552713 RAB41Q5JT25 222 aa8.83□□□□□ -1
CDK4-213ENST00000552713 C9orf64Q5T6V5 341 aa8.83□□□□□ -1
CDK4-213ENST00000552713 UNC13DQ70J99 1090 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PIGZQ86VD9 579 aa8.83□□□□□ -1
CDK4-213ENST00000552713 MMAAQ8IVH4 418 aaKnown RBP8.83□□□□□ -1
CDK4-213ENST00000552713 AHI1Q8N157 1196 aa8.83□□□□□ -1
CDK4-213ENST00000552713 AADATQ8N5Z0 425 aa8.83□□□□□ -1
CDK4-213ENST00000552713 EDEM1Q92611 657 aa8.83□□□□□ -1
CDK4-213ENST00000552713 PLD4Q96BZ4 506 aa8.83□□□□□ -1
CDK4-213ENST00000552713 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
CDK4-213ENST00000552713 SERAC1Q96JX3 654 aa8.83□□□□□ -1
CDK4-213ENST00000552713 MRGPRX3Q96LB0 322 aa8.83□□□□□ -1
CDK4-213ENST00000552713 CDK5RAP1Q96SZ6 601 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms