RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DCUN1D2Q6PH85 259 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 VSTM4Q8IW00 320 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 CHPFQ8IZ52 775 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 CARNMT1Q8N4J0 409 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 CAMKK1Q8N5S9 505 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 JOSD2Q8TAC2 188 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 VCPIP1Q96JH7 1222 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TRIM5Q9C035 493 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TKTL2Q9H0I9 626 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 ZDHHC4Q9NPG8 344 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 ABCB8Q9NUT2 735 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 TAS2R14Q9NYV8 317 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 STARD13Q9Y3M8 1113 aa19.12■□□□□ 0.65
PRPF40B-216ENST00000552301 C2CD4BA6NLJ0 364 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 SIGLEC16A6NMB1 481 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 H0Y626 953 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 DDX3XO00571 662 aaKnown RBP eCLIP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 ZBTB24O43167 697 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 PAGE1O75459 146 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 ALDH1A2O94788 518 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 PABPC1P11940 636 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 NTSR1P30989 418 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 HOXA6P31267 233 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 PTPN9P43378 593 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 FNTBP49356 437 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 DGKEP52429 567 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 TRNP1Q6NT89 227 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 LONP2Q86WA8 852 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 AHI1Q8N157 1196 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 CFAP52Q8N1V2 620 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 NKD2Q969F2 451 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 TRIM11Q96F44 468 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 RPRD1AQ96P16 312 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 MCEEQ96PE7 176 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 SIK2Q9H0K1 926 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 SEMA4AQ9H3S1 761 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 POLMQ9NP87 494 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 POLR3BQ9NW08 1133 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 ZNHIT6Q9NWK9 470 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 ARHGEF38Q9NXL2 777 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 CALCOCO1Q9P1Z2 691 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 GGA2Q9UJY4 613 aa19.11■□□□□ 0.65
PRPF40B-216ENST00000552301 ANTXRLA6NF34 631 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 SGK1O00141 431 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 TIMM44O43615 452 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 RTN2O75298 545 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 LUC7L3O95232 432 aaKnown RBP19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ADCY5O95622 1261 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 FTLP02792 175 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 HOXB2P14652 356 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 RRM1P23921 792 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 HLA-FP30511 346 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 RFC1P35251 1148 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 WASP42768 502 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 CRY1Q16526 586 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 C15orf59Q2T9L4 293 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ARL13BQ3SXY8 428 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ACBD5Q5T8D3 534 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 SARM1Q6SZW1 724 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 CHST9Q7L1S5 443 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 FAM131BQ86XD5 332 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ZBTB44Q8NCP5 570 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 OLIG1Q8TAK6 271 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 NELL1Q92832 810 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ZNF653Q96CK0 615 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ADAM33Q9BZ11 813 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 PARVAQ9NVD7 372 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 ELOVL2Q9NXB9 296 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 VANGL2Q9ULK5 521 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 HS3ST4Q9Y661 456 aa19.1■□□□□ 0.65
PRPF40B-216ENST00000552301 FANCMQ8IYD8 2048 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 A0A1B0GVM2 712 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 TCAF2A6NFQ2 919 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 NPC1O15118 1278 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 MOCS3O95396 460 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 GGCXP38435 758 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 PXNP49023 591 aaPredicted RBP19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 ATXN1P54253 815 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 AUHQ13825 339 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 CCDC14Q49A88 953 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 HGSNATQ68CP4 663 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 ANO7Q6IWH7 933 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 FBXL22Q6P050 247 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 WDR59Q6PJI9 974 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 LRRC31Q6UY01 552 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 STRADAQ7RTN6 431 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 FIBINQ8TAL6 211 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 FAM172AQ8WUF8 416 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 MYEOVQ96EZ4 313 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 PHOX2BQ99453 314 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 PRMT1Q99873 361 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 CACNA2D2Q9NY47 1150 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 BCCIPQ9P287 314 aaKnown RBP eCLIP19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 ADAMTS1Q9UHI8 967 aa19.09■□□□□ 0.65
PRPF40B-216ENST00000552301 CCDC163A0A0D9SF12 145 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 AXIN1O15169 862 aa19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 ATMINO43313 823 aaPredicted RBP19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 ATP5BP06576 529 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-216ENST00000552301 MYBL1P10243 752 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms