RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 SMYD5Q6GMV2 418 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 PMF1Q6P1K2 205 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 USP30Q70CQ3 517 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 EDEM1Q92611 657 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 TTC17Q96AE7 1141 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 ERLEC1Q96DZ1 483 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 DHTKD1Q96HY7 919 aaPredicted RBP16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 CAMK1GQ96NX5 476 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 NT5C1BQ96P26 610 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 TM7SF3Q9NS93 570 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 EIF2B4Q9UI10 523 aaKnown RBP16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 CNTN6Q9UQ52 1028 aa16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 APOBEC2Q9Y235 224 aaKnown RBP16.77■□□□□ 0.28
CALCOCO1-220ENST00000552282 ACACAQ13085 2346 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 TRIM49BA6NDI0 452 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 PSMA7O14818 248 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 MSI1O43347 362 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 ACSL4O60488 711 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 TSPAN3O60637 253 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 ASLP04424 464 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 HLA-EP13747 358 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 ACSL1P33121 698 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 SLC11A2P49281 568 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 SGSHP51688 502 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 MARSP56192 900 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 RPS14P62263 151 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 FNDC3BQ53EP0 1204 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 MBLAC2Q68D91 279 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 TMEM270Q6UE05 265 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 CCNI2Q6ZMN8 369 aaPredicted RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 FIBINQ8TAL6 211 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 UBA3Q8TBC4 463 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 WFDC5Q8TCV5 224 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 SLC39A13Q96H72 371 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 ORAI3Q9BRQ5 295 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 RSPH9Q9H1X1 276 aaPredicted RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 GAREM1Q9H706 876 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 SGK2Q9HBY8 427 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 PRSS16Q9NQE7 514 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 TOR4AQ9NXH8 423 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 DKK4Q9UBT3 224 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 FNDC3AQ9Y2H6 1198 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 PCDHB9Q9Y5E1 797 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 SMG1Q96Q15 3661 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 TMEM131Q92545 1883 aa16.76■□□□□ 0.27
CALCOCO1-220ENST00000552282 APC2O95996 2303 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 TP53BP1Q12888 1972 aaPredicted RBP16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 BAHCC1Q9P281 2608 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 SART1O43290 800 aaKnown RBP16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 SLC6A4P31645 630 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 HLA-BQ31612 363 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 TTC31Q49AM3 519 aaPredicted RBP16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 TTI2Q6NXR4 508 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 HJURPQ8NCD3 748 aaPredicted RBP16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 STK32AQ8WU08 396 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 PRICKLE1Q96MT3 831 aaPredicted RBP16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 SERPINB11Q96P15 392 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 CDC6Q99741 560 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 BTBD1Q9H0C5 482 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 C6orf106Q9H6K1 298 aaPredicted RBP16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 IL21RQ9HBE5 538 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 SUN2Q9UH99 717 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 TLR6Q9Y2C9 796 aa16.75■□□□□ 0.27
CALCOCO1-220ENST00000552282 RNF225M0QZC1 329 aaPredicted RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 TAF4O00268 1085 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 PCDHGA12O60330 932 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 SEMA4FO95754 770 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 DNTTP04053 509 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 FYNP06241 537 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 CD27P26842 260 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 CD70P32970 193 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 TBX4P57082 545 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 STIM1Q13586 685 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 HNRNPA1L2Q32P51 320 aaKnown RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 ZNF776Q68DI1 518 aaPredicted RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 NADSYN1Q6IA69 706 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 CYB5D2Q8WUJ1 264 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 IGSF8Q969P0 613 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 FCRL2Q96LA5 508 aaPredicted RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 DDX50Q9BQ39 737 aaKnown RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 TRIM62Q9BVG3 475 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 MIR1-1HGQ9H1L0 117 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 TM9SF3Q9HD45 589 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 HOOK1Q9UJC3 728 aaKnown RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 TPX2Q9ULW0 747 aaKnown RBP16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 SLCO1B1Q9Y6L6 691 aa16.74■□□□□ 0.27
CALCOCO1-220ENST00000552282 M0QYV0 167 aa16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 IGLV3-25P01717 112 aa16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 LCP1P13796 627 aa16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 POLR2EP19388 210 aaKnown RBP16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 GPD2P43304 727 aa16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 CETN1Q12798 172 aa16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 EIF4EBP2Q13542 120 aaPredicted RBP16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 TEAD4Q15561 434 aa16.73■□□□□ 0.27
CALCOCO1-220ENST00000552282 TMPRSS7Q7RTY8 843 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms