RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 CCNYQ8ND76 341 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 ZNF461Q8TAF7 563 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 PYROXD1Q8WU10 500 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 SLC39A13Q96H72 371 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 DNAJC17Q9NVM6 304 aaKnown RBP20.1■□□□□ 0.81
KRT18-207ENST00000550600 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.1■□□□□ 0.81
KRT18-207ENST00000550600 SFMBT1Q9UHJ3 866 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 ZNF638Q14966 1978 aaKnown RBP20.1■□□□□ 0.81
KRT18-207ENST00000550600 SLC38A8A6NNN8 435 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 E7EVH7 732 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 PAGE1O75459 146 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 VNN2O95498 520 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 ZDHHC11BP0C7U3 371 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 GYS2P54840 703 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 TBX4P57082 545 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 USP46P62068 366 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 AP1B1Q10567 949 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 TAF10Q12962 218 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 TRIP4Q15650 581 aaPredicted RBP20.1■□□□□ 0.81
KRT18-207ENST00000550600 ANKRD22Q5VYY1 191 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 LRRC49Q8IUZ0 686 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 ATP6V0D2Q8N8Y2 350 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 ATP11CQ8NB49 1132 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 COLGALT1Q8NBJ5 622 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 LRRC39Q96DD0 335 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 TBC1D31Q96DN5 1066 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 C9orf72Q96LT7 481 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 PWWP2AQ96N64 755 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 VAT1Q99536 393 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 PRDM12Q9H4Q4 367 aa20.1■□□□□ 0.81
KRT18-207ENST00000550600 KIAA0100Q14667 2235 aaKnown RBP20.09■□□□□ 0.81
KRT18-207ENST00000550600 TLDC2A0PJX2 215 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 SPAG6O75602 509 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 ABLIM3O94929 683 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 MAP3K6O95382 1288 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 MLLT6P55198 1093 aaPredicted RBP20.09■□□□□ 0.81
KRT18-207ENST00000550600 PPIDQ08752 370 aaKnown RBP20.09■□□□□ 0.81
KRT18-207ENST00000550600 PPIGQ13427 754 aaKnown RBP eCLIP20.09■□□□□ 0.81
KRT18-207ENST00000550600 ANKRD20A2Q5SQ80 823 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 ANKRD20A1Q5TYW2 823 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 ANKRD20A3Q5VUR7 823 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 TTC9BQ8N6N2 239 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 CCDC110Q8TBZ0 833 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 TLCD1Q96CP7 247 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 HDAC11Q96DB2 347 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 P2RY11Q96G91 374 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 LGMNQ99538 433 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 ETNK1Q9HBU6 452 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.09■□□□□ 0.81
KRT18-207ENST00000550600 OSER1Q9NX31 292 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 ZMYND8Q9ULU4 1186 aaPredicted RBP20.09■□□□□ 0.81
KRT18-207ENST00000550600 NOVA2Q9UNW9 492 aaKnown RBP20.09■□□□□ 0.81
KRT18-207ENST00000550600 SSX2IPQ9Y2D8 614 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 GREB1Q4ZG55 1949 aa20.09■□□□□ 0.81
KRT18-207ENST00000550600 URODP06132 367 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 CSH1P0DML2 217 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 CSH2P0DML3 217 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 ITGB8P26012 769 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 DEFB103AP81534 67 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 RING1Q06587 406 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 GALNT2Q10471 571 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 SEMA5AQ13591 1074 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 PARP6Q2NL67 630 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 DNAJC21Q5F1R6 531 aaKnown RBP20.08■□□□□ 0.81
KRT18-207ENST00000550600 B4GALNT4Q76KP1 1039 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 TAOK1Q7L7X3 1001 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 FCRL2Q96LA5 508 aaPredicted RBP20.08■□□□□ 0.81
KRT18-207ENST00000550600 YME1L1Q96TA2 773 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 CLSTN3Q9BQT9 956 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 VN1R3Q9BXE9 311 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 SIK2Q9H0K1 926 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 CRISPLD1Q9H336 500 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 CNOT10Q9H9A5 744 aaKnown RBP20.08■□□□□ 0.81
KRT18-207ENST00000550600 XAB2Q9HCS7 855 aaKnown RBP20.08■□□□□ 0.81
KRT18-207ENST00000550600 PRKAG2Q9UGJ0 569 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 FETUBQ9UGM5 382 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 TRHDEQ9UKU6 1024 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 PCDHB12Q9Y5F1 795 aa20.08■□□□□ 0.81
KRT18-207ENST00000550600 COL4A6Q14031 1691 aa20.08■□□□□ 0.8
KRT18-207ENST00000550600 GOLGA8MH3BSY2 632 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 CDH16O75309 829 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 TMEM63AO94886 807 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 CCDC38Q502W7 563 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 MANEALQ5VSG8 457 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 SNX30Q5VWJ9 437 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 RWDD4Q6NW29 188 aaKnown RBP20.07■□□□□ 0.8
KRT18-207ENST00000550600 LRRC31Q6UY01 552 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 PALM2Q8IXS6 379 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 UHMK1Q8TAS1 419 aaKnown RBP20.07■□□□□ 0.8
KRT18-207ENST00000550600 BTN2A3PQ96KV6 586 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 EIF2B3Q9NR50 452 aaKnown RBP20.07■□□□□ 0.8
KRT18-207ENST00000550600 MARCH2Q9P0N8 246 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 MFHAS1Q9Y4C4 1052 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
KRT18-207ENST00000550600 WASH4PA8MWX3 477 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 APRTP07741 180 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 SRGAP2BP0DMP2 458 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 ALDH1A3P47895 512 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 PPP3CCP48454 512 aa20.07■□□□□ 0.8
KRT18-207ENST00000550600 PGFP49763 221 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms