RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ENDOD1O94919 500 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FTLP02792 175 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-208ENST00000550283 MAGEA9P43362 315 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 TNFRSF4P43489 277 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 SLC11A2P49281 568 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ADKP55263 362 aaKnown RBP11.61□□□□□ -0.55
RAB5B-208ENST00000550283 HDAC4P56524 1084 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FOXK2Q01167 660 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 AMPD2Q01433 879 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 DEUP1Q05D60 604 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 DMC1Q14565 340 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CDO1Q16878 200 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FUT11Q495W5 492 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 MPPE1Q53F39 396 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ALFQ53S48 1182 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 DAB2IPQ5VWQ8 1189 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 SPECC1LQ69YQ0 1117 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 KIAA0907Q7Z7F0 614 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ADIPOR2Q86V24 386 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CHSY1Q86X52 802 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 SYNPOQ8N3V7 929 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CCDC185Q8N715 623 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FRMD1Q8N878 549 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ZBTB44Q8NCP5 570 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CYB5D2Q8WUJ1 264 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ARHGEF26Q96DR7 871 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 PGAP3Q96FM1 320 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-208ENST00000550283 MCEEQ96PE7 176 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CHP1Q99653 195 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 TKTL2Q9H0I9 626 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 MTG2Q9H4K7 406 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CD93Q9NPY3 652 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ABCB8Q9NUT2 735 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ARHGEF38Q9NXL2 777 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 CACNA2D2Q9NY47 1150 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 FBXO4Q9UKT5 387 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 NEU3Q9UQ49 428 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 SLC27A6Q9Y2P4 619 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 RAD54BQ9Y620 910 aa11.61□□□□□ -0.55
RAB5B-208ENST00000550283 ZFHX2Q9C0A1 2572 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 A0A1W2PQF6 199 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 SIGLEC16A6NMB1 481 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 HRO43593 1189 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 PAPSS2O95340 614 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 APOEP02649 317 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 KRT3P12035 628 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 PDGFRAP16234 1089 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 EIF4A3P38919 411 aaKnown RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 NBL1P41271 181 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 CTSOP43234 321 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 CCR3P51677 355 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 LMAN2Q12907 356 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 MAMLD1Q13495 774 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 AUHQ13825 339 aaKnown RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 PPP2R5DQ14738 602 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 ASTE1Q2TB18 679 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 CXorf57Q6NSI4 855 aaKnown RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 SARM1Q6SZW1 724 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 SYT13Q7L8C5 426 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 APCDD1Q8J025 514 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 PYROXD2Q8N2H3 581 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 ZNF366Q8N895 744 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 ZNF513Q8N8E2 541 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 CENPIQ92674 756 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 SYN2Q92777 582 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 BTN2A3PQ96KV6 586 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 XPO6Q96QU8 1125 aaKnown RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 PACSIN1Q9BY11 444 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 SIK2Q9H0K1 926 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 VANGL2Q9ULK5 521 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 MMP17Q9ULZ9 603 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 INVSQ9Y283 1065 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
RAB5B-208ENST00000550283 STARD13Q9Y3M8 1113 aa11.6□□□□□ -0.55
RAB5B-208ENST00000550283 EML5Q05BV3 1969 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 CFAP54Q96N23 3096 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 FANCMQ8IYD8 2048 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.59□□□□□ -0.55
RAB5B-208ENST00000550283 DCLK1O15075 740 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 LILRB5O75023 590 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 SERPING1P05155 500 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 CALB1P05937 261 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 HLA-EP13747 358 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 TCF4P15884 667 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 PRKCHP24723 683 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 MZF1P28698 734 aaPredicted RBP11.59□□□□□ -0.55
RAB5B-208ENST00000550283 HNRNPH3P31942 346 aaKnown RBP11.59□□□□□ -0.55
RAB5B-208ENST00000550283 CCR1P32246 355 aa11.59□□□□□ -0.55
RAB5B-208ENST00000550283 IL12RB1P42701 662 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms