RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	CCDC181	Q5TID7	509 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	MEPCE	Q7L2J0	689 aa	Known RBP	5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	LPAR1	Q92633	364 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	GDF15	Q99988	308 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	TASP1	Q9H6P5	420 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	AAMDC	Q9H7C9	122 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	MRPL44	Q9H9J2	332 aa	Known RBP	5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	TM7SF3	Q9NS93	570 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155	CNTNAP2	Q9UHC6	1331 aa		5.21	□□□□□ -1.58
CNOT2-222	ENST00000550155		A0A1W2PPC1	479 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	ANO9	A1A5B4	782 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155		M0QZQ0	153 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	RHOD	O00212	210 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	NFATC1	O95644	943 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	GLP2R	O95838	553 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	ITGA5	P08648	1049 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	RFPL3S	P0C7P2	107 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	TGM2	P21980	687 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	POLD2	P49005	469 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	GAD2	Q05329	585 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	ERV3-1	Q14264	604 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	PGM5	Q15124	567 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	SLC35G1	Q2M3R5	365 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	PIK3CD-AS1	Q5SR53	167 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	IZUMO3	Q5VZ72	239 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	MSANTD2	Q6P1R3	559 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	C16orf89	Q6UX73	402 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	KSR2	Q6VAB6	950 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	SLC39A5	Q6ZMH5	540 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	SLC22A17	Q8WUG5	538 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	WDR60	Q8WVS4	1066 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	CLMN	Q96JQ2	1002 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	RIPOR3	Q96MK2	946 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	PAAF1	Q9BRP4	392 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	WDR83	Q9BRX9	315 aa	Known RBP	5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	SFXN1	Q9H9B4	322 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	LAMP3	Q9UQV4	416 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	DTNA	Q9Y4J8	743 aa		5.2	□□□□□ -1.58
CNOT2-222	ENST00000550155	LACTBL1	A8MY62	500 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	RASA4B	C9J798	803 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	RASA4	O43374	803 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	NCK2	O43639	380 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	CNTN5	O94779	1100 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	NTSR2	O95665	410 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	FGF2	P09038	288 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	P2RX3	P56373	397 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	SLC37A1	P57057	533 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	GPR162	Q16538	588 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	LONRF1	Q17RB8	773 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	ANKRD40	Q6AI12	368 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	PDXDC1	Q6P996	788 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	CYB5R4	Q7L1T6	521 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	PELI3	Q8N2H9	469 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	TMEM174	Q8WUU8	243 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	WASF1	Q92558	559 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	NPIPB3	Q92617	1050 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	CCDC138	Q96M89	665 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	ZPBP	Q9BS86	351 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	TMEM204	Q9BSN7	226 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	RBM38	Q9H0Z9	239 aa	Known RBP	5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	EPS8L2	Q9H6S3	715 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	CERS4	Q9HA82	394 aa		5.19	□□□□□ -1.58
CNOT2-222	ENST00000550155	GXYLT2	A0PJZ3	443 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	PPP6R2	O75170	966 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	TAF5L	O75529	589 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	ALDOA	P04075	364 aa	Known RBP	5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	AK2	P54819	239 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	TTC39A	Q5SRH9	613 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	TMEM88	Q6PEY1	159 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	DDIAS	Q8IXT1	998 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	OR2C3	Q8N628	320 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	OR52N4	Q8NGI2	321 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	MSI2	Q96DH6	328 aa	Known RBP	5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	PCGF6	Q9BYE7	350 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	KCNK9	Q9NPC2	374 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	FSCN3	Q9NQT6	498 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	NFU1	Q9UMS0	254 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155	TNFSF13B	Q9Y275	285 aa		5.18	□□□□□ -1.58
CNOT2-222	ENST00000550155		A0A0G2JK05	382 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	C3orf70	A6NLC5	250 aa	Predicted RBP	5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	NKX2-8	O15522	239 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	ATG13	O75143	517 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	CAND2	O75155	1236 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	KRT18	P05783	430 aa	Known RBP	5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	TGFB3	P10600	412 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	ALDH18A1	P54886	795 aa	Known RBP	5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	RAB30	Q15771	203 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	ZNF569	Q5MCW4	686 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	EME1	Q96AY2	570 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	ZNF347	Q96SE7	839 aa		5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	NTPCR	Q9BSD7	190 aa	Known RBP	5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	SF3B5	Q9BWJ5	86 aa	Known RBP	5.17	□□□□□ -1.58
CNOT2-222	ENST00000550155	DHH	O43323	396 aa		5.16	□□□□□ -1.58
CNOT2-222	ENST00000550155	CER1	O95813	267 aa		5.16	□□□□□ -1.58
CNOT2-222	ENST00000550155	ANXA6	P08133	673 aa		5.16	□□□□□ -1.58
CNOT2-222	ENST00000550155	CHRNB1	P11230	501 aa		5.16	□□□□□ -1.58
CNOT2-222	ENST00000550155	HSPA7	P48741	367 aa		5.16	□□□□□ -1.58
CNOT2-222	ENST00000550155	PICALM	Q13492	652 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms