RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 CALB2P22676 271 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 ZNF132P52740 706 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 LILRA4P59901 499 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 SOWAHAQ2M3V2 549 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 NBPF20Q3BBV1 942 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 KCNMB4Q86W47 210 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 WDTC1Q8N5D0 677 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 CMASQ8NFW8 434 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 OXNAD1Q96HP4 312 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 NT5MQ9NPB1 228 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 ENO3P13929 434 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 ATXN3P54252 364 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 SLC25A11Q02978 314 aaKnown RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 CDH17Q12864 832 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 KLF1Q13351 362 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 RCN1Q15293 331 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 SIX1Q15475 284 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 UNC5AQ6ZN44 842 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 FAM35AQ86V20 835 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 GEMIN8Q9NWZ8 242 aaKnown RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 RABGEF1Q9UJ41 708 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 RREB1Q92766 1687 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 UNC5CO95185 931 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 GFAPP14136 432 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 TSHRP16473 764 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 BRCC3P46736 316 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 CDK16Q00536 496 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 MYLPFQ96A32 169 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 CMTM5Q96DZ9 223 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 ILKAPQ9H0C8 392 aaPredicted RBP17.3■□□□□ 0.36
ATXN2-219ENST00000550104 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
ATXN2-219ENST00000550104 A0A096LPK6 155 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 IRF1P10914 325 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 NDUFV1P49821 464 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 RAB27AP51159 221 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 OASLQ15646 514 aaKnown RBP17.29■□□□□ 0.36
ATXN2-219ENST00000550104 SLC39A12Q504Y0 691 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 STRADAQ7RTN6 431 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 EFHBQ8N7U6 833 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 BLOC1S5Q8TDH9 187 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 APBB2Q92870 758 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 FAM136AQ96C01 138 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 RMDN2Q96LZ7 410 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 APBA2Q99767 749 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-219ENST00000550104 SLC2A3P11169 496 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 CLDN10P78369 228 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 BST1Q10588 318 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 PDCD2Q16342 344 aaPredicted RBP17.29■□□□□ 0.36
ATXN2-219ENST00000550104 SLC44A1Q8WWI5 657 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 CACNG4Q9UBN1 327 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 MFSD11O43934 449 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 SMIM24O75264 130 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 VAPBO95292 243 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 COPAP53621 1224 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 EP400NLQ6ZTU2 488 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 TAS2R42Q7RTR8 314 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 PCDHA11Q9Y5I1 949 aa17.29■□□□□ 0.36
ATXN2-219ENST00000550104 E9PBE3 544 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 KLHL41O60662 606 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 DAB1O75553 588 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 CHEK2O96017 543 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 SLC1A6P48664 564 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 UBAP2Q5T6F2 1119 aaKnown RBP17.28■□□□□ 0.36
ATXN2-219ENST00000550104 ANKS1BQ7Z6G8 1248 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 PSTKQ8IV42 348 aaKnown RBP17.28■□□□□ 0.36
ATXN2-219ENST00000550104 DDIASQ8IXT1 998 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 ATP6V0D2Q8N8Y2 350 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 CALML6Q8TD86 181 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 IL1RAPL1Q9NZN1 696 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 TRHDEQ9UKU6 1024 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 PCDHB7Q9Y5E2 793 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 SLC12A8A0AV02 714 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 MDM4O15151 490 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 PRPF4O43172 522 aaKnown RBP eCLIP17.28■□□□□ 0.366e-9■■□□□ 12.3
ATXN2-219ENST00000550104 NCALDP61601 193 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 FAM187BQ17R55 369 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 SPATA24Q86W54 205 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 THAP1Q9NVV9 213 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 CDH9Q9ULB4 789 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 E5RI56 91 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 SNX2O60749 519 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 STMN1P16949 149 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 NFKB1P19838 968 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 FKBP1BP68106 108 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 FITM2Q8N6M3 262 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 TMA16Q96EY4 203 aaKnown RBP17.28■□□□□ 0.36
ATXN2-219ENST00000550104 CYP4F12Q9HCS2 524 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 NVLO15381 856 aaKnown RBP17.28■□□□□ 0.36
ATXN2-219ENST00000550104 GRK2P25098 689 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 NFE2Q16621 373 aaPredicted RBP17.28■□□□□ 0.36
ATXN2-219ENST00000550104 SPANXN3Q5MJ09 141 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 ADGRD1Q6QNK2 874 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 ECHDC2Q86YB7 292 aa17.28■□□□□ 0.36
ATXN2-219ENST00000550104 XRCC4Q13426 336 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms