RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 SFMBT2Q5VUG0 894 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 MBLAC2Q68D91 279 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 SPOPLQ6IQ16 392 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 FAM217AQ8IXS0 508 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 AHI1Q8N157 1196 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 WFIKKN2Q8TEU8 576 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 TTC9Q92623 222 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 TMA16Q96EY4 203 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 SERAC1Q96JX3 654 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 GGA2Q9UJY4 613 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 SCML1Q9UN30 329 aa11.27□□□□□ -0.61
TRAFD1-206ENST00000549358 GOLGA4Q13439 2230 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 LRRC72A6NJI9 287 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 RNASEH1O60930 286 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 POLR2EP19388 210 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 ASPAP45381 313 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 RXRGP48443 463 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 HARS2P49590 506 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 DLG4P78352 724 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 CLDN10P78369 228 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 E2F1Q01094 437 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 EHHADHQ08426 723 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 PDE4CQ08493 712 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 VAC14Q08AM6 782 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 PROX2Q3B8N5 592 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 SLC45A4Q5BKX6 768 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 KANSL1Q7Z3B3 1105 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 KIAA0907Q7Z7F0 614 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 OR2T34Q8NGX1 318 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 KCNE4Q8WWG9 221 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 PLD4Q96BZ4 506 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 MED8Q96G25 268 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 OMDQ99983 421 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 ERVMER34-1Q9H9K5 563 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 CKAP5Q14008 2032 aa11.26□□□□□ -0.61
TRAFD1-206ENST00000549358 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 MID1O15344 667 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SIGLEC6O43699 453 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SDC3O75056 442 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SIN3BO75182 1162 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 RPN1P04843 607 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SLC8A1P32418 973 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 CD70P32970 193 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 CSRP3P50461 194 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 ST8SIA6P61647 398 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 YWHAGP61981 247 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 GABREP78334 506 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 ASIC1P78348 528 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SRSF1Q07955 248 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SFSWAPQ12872 951 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 TRIP4Q15650 581 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 CST6Q15828 149 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 FAM26FQ5R3K3 315 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 PPP1R26Q5T8A7 1209 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 SPATS2Q86XZ4 545 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 MMAAQ8IVH4 418 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 HOMEZQ8IX15 550 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 C12orf56Q8IXR9 622 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 LSMEM2Q8N112 164 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 ARHGAP18Q8N392 663 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 TAF4BQ92750 862 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 DPH1Q9BZG8 443 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 TNMDQ9H2S6 317 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 MYO18BQ8IUG5 2567 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 PLXNA2O75051 1894 aa11.25□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3DA0A087WVF3 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3IA0A087WXS9 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3EA0A087X179 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3KA0A087X1G2 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3FA6NER0 549 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3LB9A6J9 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TRIM38O00635 465 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 USP12O75317 370 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 ASS1P00966 412 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3HP0C7X1 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 CD58P19256 250 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 CCR5P51681 352 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 SGSHP51688 502 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 DAB2P98082 770 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 INCA1Q0VD86 236 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 ZACNQ401N2 412 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 ADGRF1Q5T601 910 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 KIAA1614Q5VZ46 1190 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3GQ6DHY5 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3CQ6IPX1 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 TBC1D3Q8IZP1 549 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 OXR1Q8N573 874 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 OR14C36Q8NHC7 312 aa11.24□□□□□ -0.61
TRAFD1-206ENST00000549358 WFDC5Q8TCV5 224 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms