RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 PFKLP17858 780 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 ECHS1P30084 290 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 CDC25CP30307 473 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 PLTPP55058 493 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 MLLT6P55198 1093 aaPredicted RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 ERVK-21P61565 698 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 GBE1Q04446 702 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 GPS1Q13098 491 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 GPS2Q13227 327 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 SHHQ15465 462 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 TRIP13Q15645 432 aaPredicted RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 RAB30Q15771 203 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 P3H1Q32P28 736 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 MANEALQ5VSG8 457 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 IZUMO3Q5VZ72 239 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 HEATR6Q6AI08 1181 aaKnown RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 LMAN2LQ9H0V9 348 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 RETREG1Q9H6L5 497 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 ZDHHC18Q9NUE0 388 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 ETNK2Q9NVF9 386 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 ZNF446Q9NWS9 450 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 PAK5Q9P286 719 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 PPARGC1AQ9UBK2 798 aaKnown RBP12.76□□□□□ -0.37
RAB5B-204ENST00000548068 DENND4CQ5VZ89 1909 aa12.76□□□□□ -0.37
RAB5B-204ENST00000548068 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.75□□□□□ -0.37
RAB5B-204ENST00000548068 E9PAM4 449 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 KCNN4O15554 427 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 COCHO43405 550 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 TBX18O95935 607 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 OAS1P00973 400 aaKnown RBP12.75□□□□□ -0.37
RAB5B-204ENST00000548068 SRGAP2BP0DMP2 458 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 IVDP26440 423 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 HOXA9P31269 272 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 HSPA9P38646 679 aaKnown RBP12.75□□□□□ -0.37
RAB5B-204ENST00000548068 SLC11A2P49281 568 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 VPS41P49754 854 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 CLCN4P51793 760 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 ZNF33AQ06730 810 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 GPM6BQ13491 265 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 CASP8Q14790 479 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 SLMAPQ14BN4 828 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 MORF4L2Q15014 288 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 TRADDQ15628 312 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 SPDYCQ5MJ68 293 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 ZDHHC24Q6UX98 284 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 HOOK3Q86VS8 718 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 LRRC49Q8IUZ0 686 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 FAM71DQ8N9W8 422 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 FBXO25Q8TCJ0 367 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 MRPS31Q92665 395 aaKnown RBP12.75□□□□□ -0.37
RAB5B-204ENST00000548068 AZIN2Q96A70 460 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 DDX50Q9BQ39 737 aaKnown RBP12.75□□□□□ -0.37
RAB5B-204ENST00000548068 FUT8Q9BYC5 575 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 MSRAQ9UJ68 235 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 TPX2Q9ULW0 747 aaKnown RBP12.75□□□□□ -0.37
RAB5B-204ENST00000548068 SHOC2Q9UQ13 582 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 HS3ST4Q9Y661 456 aa12.75□□□□□ -0.37
RAB5B-204ENST00000548068 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-204ENST00000548068 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-204ENST00000548068 HIDE1A8MVS5 230 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 WASH4PA8MWX3 477 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 H3BNC9 293 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 GRM6O15303 877 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 XYLBO75191 536 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 LATS1O95835 1130 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 F11P03951 625 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 HMBSP08397 361 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 HNRNPA1P09651 372 aaKnown RBP eCLIP12.74□□□□□ -0.37
RAB5B-204ENST00000548068 SPATA31D3P0C874 917 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 MYOGP15173 224 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 RHOQP17081 205 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 DNAJB1P25685 340 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 RBL1P28749 1068 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 ITGA8P53708 1063 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 SLC10A2Q12908 348 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-204ENST00000548068 PRKD1Q15139 912 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-204ENST00000548068 MS4A13Q5J8X5 152 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 PIK3R6Q5UE93 754 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 SPATA31D4Q6ZUB0 917 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 TMC3Q7Z5M5 1100 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 CHSY1Q86X52 802 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 PPIL6Q8IXY8 311 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 RTL3Q8N8U3 475 aaKnown RBP12.74□□□□□ -0.37
RAB5B-204ENST00000548068 LEMD2Q8NC56 503 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 HTR3CQ8WXA8 447 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 ZYG11BQ9C0D3 744 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 KLC2Q9H0B6 622 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 NEUROG2Q9H2A3 272 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 USP29Q9HBJ7 922 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 ASAH2Q9NR71 780 aa12.74□□□□□ -0.37
RAB5B-204ENST00000548068 DOCK4Q8N1I0 1966 aa12.73□□□□□ -0.37
RAB5B-204ENST00000548068 IGLV3-10A0A075B6K4 115 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms