RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.31
BRF1-208ENST00000546997 ATAD1Q8NBU5 361 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 BBOF1Q8ND07 529 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 MGARPQ8TDB4 240 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 KCTD13Q8WZ19 329 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 NDRG1Q92597 394 aaKnown RBP17.02■□□□□ 0.31
BRF1-208ENST00000546997 DTNBP1Q96EV8 351 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 CCDC28BQ9BUN5 200 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 MTIF3Q9H2K0 278 aaKnown RBP17.02■□□□□ 0.31
BRF1-208ENST00000546997 DMAP1Q9NPF5 467 aaPredicted RBP17.02■□□□□ 0.31
BRF1-208ENST00000546997 AAASQ9NRG9 546 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 MTRRQ9UBK8 725 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 LRCH1Q9Y2L9 728 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.31
BRF1-208ENST00000546997 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 FGF18O76093 207 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 ABHD2P08910 425 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 MYOGP15173 224 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 PPM1AP35813 382 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 OCRLQ01968 901 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 KRT17Q04695 432 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 ADCY1Q08828 1119 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 SHHQ15465 462 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 CCNG2Q16589 344 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
BRF1-208ENST00000546997 FBXO22Q8NEZ5 403 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 AUTS2Q8WXX7 1259 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 KHSRPQ92945 711 aaKnown RBP eCLIP17.01■□□□□ 0.31
BRF1-208ENST00000546997 FAM136AQ96C01 138 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 SNF8Q96H20 258 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 RBM41Q96IZ5 413 aaKnown RBP17.01■□□□□ 0.31
BRF1-208ENST00000546997 HERC2P3Q9BVR0 1158 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 MYLK2Q9H1R3 596 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 CRISPLD1Q9H336 500 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 TRIM33Q9UPN9 1127 aa17.01■□□□□ 0.31
BRF1-208ENST00000546997 ARHGEF15O94989 841 aa17■□□□□ 0.31
BRF1-208ENST00000546997 DNAJB2P25686 324 aa17■□□□□ 0.31
BRF1-208ENST00000546997 CDC25CP30307 473 aa17■□□□□ 0.31
BRF1-208ENST00000546997 CETN2P41208 172 aa17■□□□□ 0.31
BRF1-208ENST00000546997 ACADSBP45954 432 aa17■□□□□ 0.31
BRF1-208ENST00000546997 GLUD2P49448 558 aa17■□□□□ 0.31
BRF1-208ENST00000546997 TKTL1P51854 596 aa17■□□□□ 0.31
BRF1-208ENST00000546997 SLC6A3Q01959 620 aa17■□□□□ 0.31
BRF1-208ENST00000546997 DSG1Q02413 1049 aa17■□□□□ 0.31
BRF1-208ENST00000546997 GPR17Q13304 367 aa17■□□□□ 0.31
BRF1-208ENST00000546997 DYNC1I2Q13409 638 aaKnown RBP17■□□□□ 0.31
BRF1-208ENST00000546997 MPP2Q14168 576 aa17■□□□□ 0.31
BRF1-208ENST00000546997 RAB41Q5JT25 222 aa17■□□□□ 0.31
BRF1-208ENST00000546997 SLC8B1Q6J4K2 584 aa17■□□□□ 0.31
BRF1-208ENST00000546997 RNF19BQ6ZMZ0 732 aa17■□□□□ 0.31
BRF1-208ENST00000546997 VPS52Q8N1B4 723 aa17■□□□□ 0.31
BRF1-208ENST00000546997 ANKRD42Q8N9B4 389 aa17■□□□□ 0.31
BRF1-208ENST00000546997 KLHL23Q8NBE8 558 aa17■□□□□ 0.31
BRF1-208ENST00000546997 ATL2Q8NHH9 583 aa17■□□□□ 0.31
BRF1-208ENST00000546997 GRK7Q8WTQ7 553 aa17■□□□□ 0.31
BRF1-208ENST00000546997 SLITRK1Q96PX8 696 aa17■□□□□ 0.31
BRF1-208ENST00000546997 FAM192AQ9GZU8 254 aa17■□□□□ 0.31
BRF1-208ENST00000546997 KLHL11Q9NVR0 708 aa17■□□□□ 0.31
BRF1-208ENST00000546997 EURLQ9NYK6 297 aa17■□□□□ 0.31
BRF1-208ENST00000546997 WDR27A2RRH5 827 aa17■□□□□ 0.31
BRF1-208ENST00000546997 MTMR11A4FU01 709 aa17■□□□□ 0.31
BRF1-208ENST00000546997 FAM47DPA6NHR8 397 aa17■□□□□ 0.31
BRF1-208ENST00000546997 PI4K2BG5E9Z4 385 aa17■□□□□ 0.31
BRF1-208ENST00000546997 PDLIM1O00151 329 aa17■□□□□ 0.31
BRF1-208ENST00000546997 OR1D2P34982 312 aa17■□□□□ 0.31
BRF1-208ENST00000546997 GPR15P49685 360 aa17■□□□□ 0.31
BRF1-208ENST00000546997 ROR1Q01973 937 aa17■□□□□ 0.31
BRF1-208ENST00000546997 PTK6Q13882 451 aa17■□□□□ 0.31
BRF1-208ENST00000546997 UBAP2Q5T6F2 1119 aaKnown RBP17■□□□□ 0.31
BRF1-208ENST00000546997 TXNRD3NBQ6F5E7 133 aa17■□□□□ 0.31
BRF1-208ENST00000546997 DRAXINQ8NBI3 349 aaPredicted RBP17■□□□□ 0.31
BRF1-208ENST00000546997 STKLD1Q8NE28 680 aa17■□□□□ 0.31
BRF1-208ENST00000546997 UHMK1Q8TAS1 419 aaKnown RBP17■□□□□ 0.31
BRF1-208ENST00000546997 FNIP1Q8TF40 1166 aa17■□□□□ 0.31
BRF1-208ENST00000546997 SLC7A6OSQ96CW6 309 aaPredicted RBP17■□□□□ 0.31
BRF1-208ENST00000546997 IFT43Q96FT9 208 aa17■□□□□ 0.31
BRF1-208ENST00000546997 FUBP3Q96I24 572 aaKnown RBP eCLIP17■□□□□ 0.31
BRF1-208ENST00000546997 CLSTN3Q9BQT9 956 aa17■□□□□ 0.31
BRF1-208ENST00000546997 PPCSQ9HAB8 311 aa17■□□□□ 0.31
BRF1-208ENST00000546997 LRRC4Q9HBW1 653 aa17■□□□□ 0.31
BRF1-208ENST00000546997 SENP1Q9P0U3 644 aa17■□□□□ 0.31
BRF1-208ENST00000546997 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
BRF1-208ENST00000546997 BACE2Q9Y5Z0 518 aa17■□□□□ 0.31
BRF1-208ENST00000546997 MYO9BQ13459 2157 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 TP73O15350 636 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 PRPF4O43172 522 aaKnown RBP eCLIP16.99■□□□□ 0.31
BRF1-208ENST00000546997 SOAT2O75908 522 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 KRT1P04264 644 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 SP100P23497 879 aaPredicted RBP16.99■□□□□ 0.31
BRF1-208ENST00000546997 PSMA2P25787 234 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 PTPN4P29074 926 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 GRIK1P39086 918 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 VHLP40337 213 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 PTDSS1P48651 473 aaKnown RBP16.99■□□□□ 0.31
BRF1-208ENST00000546997 SF3A3Q12874 501 aaKnown RBP eCLIP16.99■□□□□ 0.31
BRF1-208ENST00000546997 SLC45A4Q5BKX6 768 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 SDHAF4Q5VUM1 108 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 TRIM68Q6AZZ1 485 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 MFSD7Q6UXD7 560 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms