RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 PDZD8Q8NEN9 1154 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 OR8K1Q8NGG5 319 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SLC35F5Q8WV83 523 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ING5Q8WYH8 240 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 KCTD13Q8WZ19 329 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 OVCA2Q8WZ82 227 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 TCEAL4Q96EI5 215 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 HSFY1Q96LI6 401 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CPXM1Q96SM3 734 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 AGPAT1Q99943 283 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 LRRC3Q9BY71 257 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ULBP1Q9BZM6 244 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 FBXO44Q9H4M3 255 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SLITRK6Q9H5Y7 841 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 HAUS4Q9H6D7 363 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SYNCQ9H7C4 482 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CNGB3Q9NQW8 809 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ZNHIT6Q9NWK9 470 aaKnown RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 COMMD8Q9NX08 183 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 IL37Q9NZH6 218 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 GMIPQ9P107 970 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 CYTH4Q9UIA0 394 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 SCML2Q9UQR0 700 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 FAM50BQ9Y247 325 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 MRPS23Q9Y3D9 190 aaKnown RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 BZW2Q9Y6E2 419 aaKnown RBP6.64□□□□□ -1.35
PRKDC-211ENST00000546304 MYO10Q9HD67 2058 aa6.64□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF197O14709 1029 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 FBXO21O94952 628 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ECEL1O95672 775 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ZBED1O96006 694 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ERBB2P04626 1255 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 CYP1A1P04798 512 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 PLEKP08567 350 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 USP17L7P0C7H9 530 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 SKILP12757 684 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 LCP1P13796 627 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 IL9P15248 144 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 GJA1P17302 382 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 SP100P23497 879 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ACADSBP45954 432 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 NSFP46459 744 aaKnown RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 CD97P48960 835 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 RPL34P49207 117 aaKnown RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TUBP50607 506 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 KCNQ1P51787 676 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 DAOAP59103 153 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TEAD2Q15562 447 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ARHGAP15Q53QZ3 475 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 STXBP5Q5T5C0 1151 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ALG1LQ6GMV1 187 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 WDR59Q6PJI9 974 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 OLFML1Q6UWY5 402 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 MMS22LQ6ZRQ5 1243 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TOGARAM2Q6ZUX3 1019 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 FAM183BPQ6ZVS7 135 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 MON1BQ7L1V2 547 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 BHLHA9Q7RTU4 235 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TICRRQ7Z2Z1 1910 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TMEM150AQ86TG1 271 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TDRD5Q8NAT2 981 aaKnown RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ITFG1Q8TB96 612 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 CLEC4CQ8WTT0 213 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 MRPS31Q92665 395 aaKnown RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 EZH1Q92800 747 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 FGF13Q92913 245 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 PIWIL1Q96J94 861 aaKnown RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 PPP1R13BQ96KQ4 1090 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 PCDHB18PQ96TA0 734 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 C11orf70Q9BRQ4 267 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 UBXN6Q9BZV1 441 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 MIS12Q9H081 205 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ATXN3LQ9H3M9 355 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 GSX1Q9H4S2 264 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TRPC7Q9HCX4 862 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TLR8Q9NR97 1041 aaKnown RBP6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TRPM5Q9NZQ8 1165 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 ARHGAP20Q9P2F6 1191 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 IMPACTQ9P2X3 320 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 TJP2Q9UDY2 1190 aa6.63□□□□□ -1.35
PRKDC-211ENST00000546304 F5P12259 2224 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 COL4A2P08572 1712 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 A0A1W2PQH9 124 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 SSU72P8A0A1W2PR75 194 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ZNF840PA6NDX5 716 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PRR19A6NJB7 356 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 DDX3XO00571 662 aaKnown RBP eCLIP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 GIPC1O14908 333 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PAPSS1O43252 624 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 TLR5O60602 858 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 MOSPD3O75425 235 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 PRAMEF12O95522 483 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 OLFM2O95897 454 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 OAS1P00973 400 aaKnown RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 CKMP06732 381 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 ZDHHC11BP0C7U3 371 aa6.62□□□□□ -1.35
PRKDC-211ENST00000546304 UNGP13051 313 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-211ENST00000546304 TNFAIP3P21580 790 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms