RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TLR4O00206 839 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 KLK10O43240 276 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SIGLEC6O43699 453 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SDC3O75056 442 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SIN3BO75182 1162 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 KIF20AO95235 890 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 CD2BP2O95400 341 aaKnown RBP9.8□□□□□ -0.84
CHD4-212ENST00000545083 CD70P32970 193 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 TXLNAP40222 546 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 ARRB1P49407 418 aaPredicted RBP9.8□□□□□ -0.84
CHD4-212ENST00000545083 UCNP55089 124 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 GABREP78334 506 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 DLG4P78352 724 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 CLDN10P78369 228 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 PDE4CQ08493 712 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 VAC14Q08AM6 782 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 TRIP4Q15650 581 aaPredicted RBP9.8□□□□□ -0.84
CHD4-212ENST00000545083 BROXQ5VW32 411 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 KIAA1614Q5VZ46 1190 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 FAM173BQ6P4H8 233 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 PDILTQ8N807 584 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 OR2T34Q8NGX1 318 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 PARD3BQ8TEW8 1205 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 KCNE4Q8WWG9 221 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 NDRG1Q92597 394 aaKnown RBP9.8□□□□□ -0.84
CHD4-212ENST00000545083 GOLGA1Q92805 767 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SKA1Q96BD8 255 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 MED8Q96G25 268 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SERAC1Q96JX3 654 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 CDK5RAP1Q96SZ6 601 aaKnown RBP9.8□□□□□ -0.84
CHD4-212ENST00000545083 CAAP1Q9H8G2 361 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 ASCL3Q9NQ33 180 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SUN2Q9UH99 717 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 NCKAP1Q9Y2A7 1128 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 SSUH2Q9Y2M2 353 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 USP9XQ93008 2570 aaPredicted RBP9.79□□□□□ -0.84
CHD4-212ENST00000545083 LRRK2Q5S007 2527 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
CHD4-212ENST00000545083 LRRC72A6NJI9 287 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 STX6O43752 255 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 EXOC3O60645 756 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 DXOO77932 396 aaKnown RBP9.79□□□□□ -0.84
CHD4-212ENST00000545083 CSRP3P50461 194 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 CCR5P51681 352 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 PPP2CBP62714 309 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 PPP2CAP67775 309 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 INCA1Q0VD86 236 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 CST6Q15828 149 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 E2F4Q16254 413 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 FAM26FQ5R3K3 315 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
CHD4-212ENST00000545083 CDCP2Q5VXM1 449 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 PRICKLE2Q7Z3G6 844 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 C12orf56Q8IXR9 622 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 AHI1Q8N157 1196 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 AADATQ8N5Z0 425 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 PLD4Q96BZ4 506 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 TMA16Q96EY4 203 aaKnown RBP9.79□□□□□ -0.84
CHD4-212ENST00000545083 VCPIP1Q96JH7 1222 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 LMLNQ96KR4 655 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 MRGPRX3Q96LB0 322 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 DUSP16Q9BY84 665 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 ERVMER34-1Q9H9K5 563 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 KBTBD4Q9NVX7 518 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 IL17BQ9UHF5 180 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 STOML2Q9UJZ1 356 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 SCML1Q9UN30 329 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 AHCTF1Q8WYP5 2266 aa9.79□□□□□ -0.84
CHD4-212ENST00000545083 K7ENP7 123 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 USP12O75317 370 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 RNASEH2AO75792 299 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 ATP5BP06576 529 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 P4HA1P13674 534 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 POLR2EP19388 210 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 SLC8A1P32418 973 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 LSSP48449 732 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 AP3M2P53677 418 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 ADPRHP54922 357 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 YWHAGP61981 247 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD4-212ENST00000545083 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 ASIC1P78348 528 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 E2F1Q01094 437 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 CEBPZQ03701 1054 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 HNRNPA1L2Q32P51 320 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 ZACNQ401N2 412 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 RAB41Q5JT25 222 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 C9orf64Q5T6V5 341 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 INO80CQ6PI98 192 aaPredicted RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 RSRC2Q7L4I2 434 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 BHLHA9Q7RTU4 235 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 MMAAQ8IVH4 418 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 SLC25A45Q8N413 288 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 NT5C1AQ9BXI3 368 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 TNMDQ9H2S6 317 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 POLR1BQ9H9Y6 1135 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 APOBEC3GQ9HC16 384 aaKnown RBP9.78□□□□□ -0.84
CHD4-212ENST00000545083 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
CHD4-212ENST00000545083 INTS6Q9UL03 887 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms