RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZFYVE28Q9HCC9 887 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ADAM28Q9UKQ2 775 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 NRCAMQ92823 1304 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ZBBXA8MT70 800 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 CELF2O95319 508 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 ATG7O95352 703 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 CPB1P15086 417 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ARF4P18085 180 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 TPSB2P20231 275 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PSMB4P28070 264 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 NUDT2P50583 147 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 POU5F1Q01860 360 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 RIPK1Q13546 671 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 SNX17Q15036 470 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TPSAB1Q15661 275 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 SLC1A5Q15758 541 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 CNGA3Q16281 694 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 B3GNT9Q6UX72 402 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 DDIASQ8IXT1 998 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 OR6P1Q8NGX9 317 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PAWRQ96IZ0 340 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 ABHD16BQ9H3Z7 469 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 UTP6Q9NYH9 597 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 ZNF112Q9UJU3 913 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 PEX10O60683 326 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PDE5AO76074 875 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 UBTFL6P0CB48 400 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 THRAP10827 490 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ENO3P13929 434 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 NOS2P35228 1153 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 MPP3Q13368 585 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PDAP1Q13442 181 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 NET1Q7Z628 596 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 CYP4X1Q8N118 509 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 LRRC52Q8N7C0 313 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TMEM174Q8WUU8 243 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PBXIP1Q96AQ6 731 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 EBNA1BP2Q99848 306 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 SDCBP2Q9H190 292 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PIH1D1Q9NWS0 290 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 SNCAIPQ9Y6H5 919 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 LY75O60449 1722 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 SYCE1LA8MT33 242 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 XPO1O14980 1071 aaKnown RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 FKBP6O75344 327 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 RASSF9O75901 435 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PSMG1O95456 288 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 MMP3P08254 477 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TCF4P15884 667 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 CDK7P50613 346 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 PRKAA2P54646 552 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 CDH17Q12864 832 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TAF5Q15542 800 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ZCCHC23Q6ZST2 131 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ARCQ7LC44 396 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TMEM86AQ8N2M4 240 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TERB1Q8NA31 727 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ZNF483Q8TF39 744 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 JADE3Q92613 823 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 FAR2Q96K12 515 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 HSFY1Q96LI6 401 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ZNF317Q96PQ6 595 aaPredicted RBP5.93□□□□□ -1.46
VPS50-220ENST00000544910 QKIQ96PU8 341 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS50-220ENST00000544910 FZD8Q9H461 694 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 RNPEPL1Q9HAU8 725 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TBC1D13Q9NVG8 400 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 ARMCX1Q9P291 453 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 TUBGCP4Q9UGJ1 667 aa5.93□□□□□ -1.46
VPS50-220ENST00000544910 UBA6A0AVT1 1052 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 MGRN1O60291 552 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 KPNA6O60684 536 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DGKIO75912 1065 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 GOT1P17174 413 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 NPR3P17342 541 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 PTPN1P18031 435 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 ATP4AP20648 1035 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 GABRB2P47870 512 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZNF135P52742 658 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 SEL1L3Q68CR1 1132 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 C6orf89Q6UWU4 347 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 UNC5AQ6ZN44 842 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ATP6V0D2Q8N8Y2 350 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DDHD1Q8NEL9 900 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 LRRN4Q8WUT4 740 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SLCO1B3Q9NPD5 702 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 DDX28Q9NUL7 540 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZNF212Q9UDV6 495 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SUN2Q9UH99 717 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 ZNF229Q9UJW7 825 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 RPL26L1Q9UNX3 145 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 FNDC3AQ9Y2H6 1198 aaKnown RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 RAD54BQ9Y620 910 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 QSER1Q2KHR3 1735 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.92□□□□□ -1.46
VPS50-220ENST00000544910 TMEM114B3SHH9 223 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 SLCO1B7G3V0H7 640 aa5.92□□□□□ -1.46
VPS50-220ENST00000544910 H0Y626 953 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms