RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 AMPD1P23109 780 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 ADIGQ0VDE8 80 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 MFSD10Q14728 455 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 ARL13BQ3SXY8 428 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 UBXN11Q5T124 520 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 OTUD1Q5VV17 481 aaPredicted RBP12.81□□□□□ -0.36
PAAF1-215ENST00000544909 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 RFX8Q6ZV50 586 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 SREK1Q8WXA9 508 aaKnown RBP12.81□□□□□ -0.36
PAAF1-215ENST00000544909 IRGQQ8WZA9 623 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 NMUR2Q9GZQ4 415 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 FAM49AQ9H0Q0 323 aaPredicted RBP12.81□□□□□ -0.36
PAAF1-215ENST00000544909 PCMTD2Q9NV79 361 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 STX18Q9P2W9 335 aaKnown RBP12.81□□□□□ -0.36
PAAF1-215ENST00000544909 TAGLN3Q9UI15 199 aa12.81□□□□□ -0.36
PAAF1-215ENST00000544909 SPTLC1O15269 473 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 PSMD3O43242 534 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 PLIN3O60664 434 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 USP1O94782 785 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 KLHL2O95198 593 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 ALDOAP04075 364 aaKnown RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 FAM200BP0CF97 657 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 GM2AP17900 193 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 PTPN1P18031 435 aaKnown RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 LMO2P25791 158 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 CYP2C18P33260 490 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 PRKAA2P54646 552 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 PPIDQ08752 370 aaKnown RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 MTM1Q13496 603 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 DCAF6Q58WW2 860 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 RAB41Q5JT25 222 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 MBLAC2Q68D91 279 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 TMEM135Q86UB9 458 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 FAM131BQ86XD5 332 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 TMEM130Q8N3G9 435 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 CLEC4CQ8WTT0 213 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 NAF1Q96HR8 494 aaKnown RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 ZNF570Q96NI8 536 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 PPP1R10Q96QC0 940 aaKnown RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 FBXO6Q9NRD1 293 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-215ENST00000544909 ZFATQ9P243 1243 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 ZNF212Q9UDV6 495 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 IPPQ9Y573 584 aa12.8□□□□□ -0.36
PAAF1-215ENST00000544909 EEF2KO00418 725 aaKnown RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 SNUPNO95149 360 aaKnown RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 APOA4P06727 396 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 ITGA2BP08514 1039 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 ATP6V1C1P21283 382 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 SPRP35270 261 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 ADRA1BP35368 520 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 VHLP40337 213 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 POLD2P49005 469 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 CSE1LP55060 971 aaKnown RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 DEUP1Q05D60 604 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 IFRD2Q12894 506 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 GLRA4Q5JXX5 417 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 C9orf131Q5VYM1 1079 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-215ENST00000544909 PPP4R1Q8TF05 950 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 CERS2Q96G23 380 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 DNAJC28Q9NX36 388 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 BFARQ9NZS9 450 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 NUMBLQ9Y6R0 609 aa12.79□□□□□ -0.36
PAAF1-215ENST00000544909 FAM237BA0A1B0GVD1 139 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 WDR27A2RRH5 827 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 SPECC1L-ADORA2AF8WAN1 911 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 TIMM44O43615 452 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 KPNA6O60684 536 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 GSRP00390 522 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 NPY2RP49146 381 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PSEN2P49810 448 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 SERPINB8P50452 374 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 DAOAP59103 153 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 MRPS35P82673 323 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 BLMHQ13867 455 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 TAF11Q15544 211 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 CASC4Q6P4E1 433 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 TLK2Q86UE8 772 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 LMNTD2Q8IXW0 634 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 ZNF567Q8N184 647 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 MPP5Q8N3R9 675 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
PAAF1-215ENST00000544909 OR6Y1Q8NGX8 325 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 STMN2Q93045 179 aa12.78□□□□□ -0.36
PAAF1-215ENST00000544909 LGMNQ99538 433 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms