RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PARVAQ9NVD7 372 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 ASNSD1Q9NWL6 643 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 DDX43Q9NXZ2 648 aaKnown RBP6.87□□□□□ -1.31
CDCA3-209ENST00000544610 EHD2Q9NZN4 543 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 JRKLQ9Y4A0 524 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 PAXBP1Q9Y5B6 917 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 WNT6Q9Y6F9 365 aa6.87□□□□□ -1.31
CDCA3-209ENST00000544610 EML5Q05BV3 1969 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 CACNA1BQ00975 2339 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 TCRBV5S1A1TA0A578 114 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 C2orf78A6NCI8 922 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SIGLEC16A6NMB1 481 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 C4orf47A7E2U8 309 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 MIF4GDA9UHW6 222 aaKnown RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 HCRTO43612 131 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 LZTS3O60299 673 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 CLSTN1O94985 981 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 NFATC1O95644 943 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PROS1P07225 676 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PNMA6AP0CW24 399 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 CD19P15391 556 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ZNF16P17020 682 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 DESP17661 470 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PFKLP17858 780 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 NOVA1P51513 510 aaKnown RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 DGKEP52429 567 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ZXDBP98169 803 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 CYP27A1Q02318 531 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PTP4A2Q12974 167 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 MTA1Q13330 715 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PDCLQ13371 301 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PMS2CLQ68D20 193 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SCARA3Q6AZY7 606 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SCARA5Q6ZMJ2 495 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ACOT1Q86TX2 421 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 RASSF3Q86WH2 238 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ERICH1Q86X53 443 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SPATA2LQ8IUW3 424 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 FUKQ8N0W3 1084 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 KIAA1958Q8N8K9 716 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 NIPA2Q8N8Q9 360 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ARL14EPQ8N8R7 260 aaPredicted RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ACRBPQ8NEB7 543 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 TSTD1Q8NFU3 115 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SH3RF2Q8TEC5 729 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SLC20A1Q8WUM9 679 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 IRGQQ8WZA9 623 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 C18orf8Q96DM3 657 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 SMARCD1Q96GM5 515 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 FAM84AQ96KN4 292 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 TWNKQ96RR1 684 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 PCDHB18PQ96TA0 734 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 USB1Q9BQ65 265 aaKnown RBP6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ZSWIM1Q9BR11 485 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 CNGB3Q9NQW8 809 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 IGSF5Q9NSI5 407 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 RRN3Q9NYV6 651 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ADAM22Q9P0K1 906 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 MAP10Q9P2G4 905 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 RNF14Q9UBS8 474 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 TSPAN16Q9UKR8 245 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ARHGAP26Q9UNA1 814 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 WASF3Q9UPY6 502 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 DENND4CQ5VZ89 1909 aa6.86□□□□□ -1.31
CDCA3-209ENST00000544610 FAM92AA1XBS5 289 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 K7EQS6 105 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 MYO1FO00160 1098 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 CDX4O14627 284 aaPredicted RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 GIPC1O14908 333 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 KHNYNO15037 678 aaKnown RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 FAM200BP0CF97 657 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 HDCP19113 662 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 BRD2P25440 801 aaKnown RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 LMO2P25791 158 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 GBP1P32455 592 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 OPRD1P41143 372 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 KCNC4Q03721 635 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 ZNF252P-AS1Q0IIN9 211 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 PIGHQ14442 188 aaPredicted RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 SWI5Q1ZZU3 235 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 GAB4Q2WGN9 574 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 ZNF394Q53GI3 561 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 USP39Q53GS9 565 aaKnown RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 RAB41Q5JT25 222 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 PPP1R26Q5T8A7 1209 aaPredicted RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 ACBD5Q5T8D3 534 aaPredicted RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 SH3PXD2AQ5TCZ1 1133 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 LRRC38Q5VT99 294 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 DAB2IPQ5VWQ8 1189 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 NAA35Q5VZE5 725 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 PAPD7Q5XG87 772 aaKnown RBP6.85□□□□□ -1.31
CDCA3-209ENST00000544610 PM20D1Q6GTS8 502 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 ANO7Q6IWH7 933 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 UNQ6494/PRO21346Q6UXR6 183 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 SLC26A9Q7LBE3 791 aa6.85□□□□□ -1.31
CDCA3-209ENST00000544610 VSIG1Q86XK7 387 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms