RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 C10orf120Q5SQS8 335 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 PRPF39Q86UA1 669 aaKnown RBP14.09□□□□□ -0.15
HCFC2-202ENST00000544223 HOOK3Q86VS8 718 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 SRRM1Q8IYB3 904 aaKnown RBP14.09□□□□□ -0.15
HCFC2-202ENST00000544223 COLGALT1Q8NBJ5 622 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 IRGQQ8WZA9 623 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 PGAP3Q96FM1 320 aaPredicted RBP14.09□□□□□ -0.15
HCFC2-202ENST00000544223 CLSTN3Q9BQT9 956 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 FRMD8P1Q9BZ68 369 aaPredicted RBP14.09□□□□□ -0.15
HCFC2-202ENST00000544223 SLC17A6Q9P2U8 582 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 ZMYND8Q9ULU4 1186 aaPredicted RBP14.09□□□□□ -0.15
HCFC2-202ENST00000544223 HS3ST4Q9Y661 456 aa14.09□□□□□ -0.15
HCFC2-202ENST00000544223 TBC1D4O60343 1298 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 YWHAQP27348 245 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 GJA8P48165 433 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 IFNAR2P48551 515 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 PPP2R2AP63151 447 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 GPR17Q13304 367 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 EIF4EBP2Q13542 120 aaPredicted RBP14.08□□□□□ -0.15
HCFC2-202ENST00000544223 MPP2Q14168 576 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 ARTNQ5T4W7 220 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 PIK3R6Q5UE93 754 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 CES3Q6UWW8 571 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 ZNF534Q76KX8 674 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 KDELC2Q7Z4H8 507 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 CDKL3Q8IVW4 592 aaPredicted RBP14.08□□□□□ -0.15
HCFC2-202ENST00000544223 FBF1Q8TES7 1133 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 TOP1MTQ969P6 601 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 NTAN1Q96AB6 310 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 TOX2Q96NM4 488 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.15
HCFC2-202ENST00000544223 C12orf65Q9H3J6 166 aaKnown RBP14.08□□□□□ -0.15
HCFC2-202ENST00000544223 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 PLAC1Q9HBJ0 212 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 PNPLA8Q9NP80 782 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 PAK5Q9P286 719 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 SLC12A6Q9UHW9 1150 aa14.08□□□□□ -0.15
HCFC2-202ENST00000544223 ARHGEF37A1IGU5 675 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 CCDC78A2IDD5 438 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 ZBBXA8MT70 800 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 E7EVH7 732 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
HCFC2-202ENST00000544223 CNTN5O94779 1100 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 RAG1P15918 1043 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 DMTNQ08495 405 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 SCAPQ12770 1279 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 BTG3Q14201 252 aaPredicted RBP14.08□□□□□ -0.16
HCFC2-202ENST00000544223 CNKSR3Q6P9H4 555 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 PDIK1LQ8N165 341 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 DNAJC5GQ8N7S2 189 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 ARHGEF2Q92974 986 aaKnown RBP14.08□□□□□ -0.16
HCFC2-202ENST00000544223 NCAPGQ9BPX3 1015 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 SMOC2Q9H3U7 446 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 SCML2Q9UQR0 700 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 MAD1L1Q9Y6D9 718 aa14.08□□□□□ -0.16
HCFC2-202ENST00000544223 TTC24A2A3L6 582 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 SPAG7O75391 227 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 F9P00740 461 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 ZFXP17010 805 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 NR2C2P49116 596 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 KCNQ1P51787 676 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 WDR5P61964 334 aaKnown RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PRKD1Q15139 912 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 SPDYCQ5MJ68 293 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 C16orf59Q7L2K0 433 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PID1Q7Z2X4 250 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PALM2Q8IXS6 379 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 VPS52Q8N1B4 723 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 ANKRD42Q8N9B4 389 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 RTP4Q96DX8 246 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 C8orf48Q96LL4 319 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 SLC9A7Q96T83 725 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 GORASP1Q9BQQ3 440 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 MRPL9Q9BYD2 267 aaKnown RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 A0A1W2PPM1 405 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 GOLGA8RI6L899 631 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 TRIM66O15016 1216 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 ZBTB24O43167 697 aaPredicted RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 UGT1A9O60656 530 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 CHN1P15882 459 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 CCR1P32246 355 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 TUBP50607 506 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PAFAH1B3Q15102 231 aaKnown RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PKN2Q16513 984 aaKnown RBP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 AGBL2Q5U5Z8 902 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 VSTM1Q6UX27 236 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 OTOP3Q7RTS5 596 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PCGF5Q86SE9 256 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 MON1AQ86VX9 555 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 C4orf33Q8N1A6 199 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PGM2Q96G03 612 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 FUBP3Q96I24 572 aaKnown RBP eCLIP14.07□□□□□ -0.16
HCFC2-202ENST00000544223 PKNOX2Q96KN3 472 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 EPAS1Q99814 870 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 KLC2Q9H0B6 622 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 UGT1A7Q9HAW7 530 aa14.07□□□□□ -0.16
HCFC2-202ENST00000544223 UGT1A10Q9HAW8 530 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms