RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CALCOCO1Q9P1Z2 691 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 XPO7Q9UIA9 1087 aaKnown RBP6.53□□□□□ -1.36
LTBR-212ENST00000543542 NENFQ9UMX5 172 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 TFR2Q9UP52 801 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 AP4E1Q9UPM8 1137 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 SNX10Q9Y5X0 201 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 HS3ST4Q9Y661 456 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 COL4A2P08572 1712 aa6.53□□□□□ -1.36
LTBR-212ENST00000543542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 MACROD2A1Z1Q3 448 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 FAM86C2PA6NEL3 165 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 OTOL1A6NHN0 477 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 E9PAM4 449 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 EEF2KO00418 725 aaKnown RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 HOXC11O43248 304 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 KRT86O43790 486 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 TULP3O75386 442 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 LRCH4O75427 683 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 PROSCO94903 275 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 MOCS3O95396 460 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 RHOCP08134 193 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 CCDC175P0C221 793 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 DRD1P21728 446 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 MIPP30301 263 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 PCK1P35558 622 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 SGSHP51688 502 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 AIF1P55008 147 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 MLLT6P55198 1093 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 STARD6P59095 220 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 TPI1P60174 286 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 RPS24P62847 133 aaKnown RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 ZNF252P-AS1Q0IIN9 211 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 ZNF177Q13360 481 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 EIF4EBP2Q13542 120 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 SMTNL2Q2TAL5 461 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 BOLA3Q53S33 107 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 FAM133BQ5BKY9 247 aaKnown RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 PPP6R3Q5H9R7 873 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 ERMARDQ5T6L9 678 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 TTC39BQ5VTQ0 682 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 FYB2Q5VWT5 728 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 FBXL22Q6P050 247 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 TXNDC11Q6PKC3 985 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 C14orf80Q86SX3 495 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 DAAM2Q86T65 1068 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 C12orf40Q86WS4 652 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 CIR1Q86X95 450 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 ZNF354CQ86Y25 554 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 ZNF557Q8N988 423 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 CCDC26Q8TAB7 109 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 UCMAQ8WVF2 138 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 CENPIQ92674 756 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 NTAN1Q96AB6 310 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 TBC1D31Q96DN5 1066 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 C1orf74Q96LT6 269 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 ZNF830Q96NB3 372 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 NELL2Q99435 816 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 EPAS1Q99814 870 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 IRX2Q9BZI1 471 aaPredicted RBP6.52□□□□□ -1.37
LTBR-212ENST00000543542 TSGA10Q9BZW7 698 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 FOXQ1Q9C009 403 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 CIPCQ9C0C6 399 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 ZYG11BQ9C0D3 744 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 LMAN1LQ9HAT1 526 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 LTB4R2Q9NPC1 389 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 GPATCH2LQ9NWQ4 482 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 MARK1Q9P0L2 795 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 OR12D3Q9UGF7 316 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 STOML2Q9UJZ1 356 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 FZD10Q9ULW2 581 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 USP18Q9UMW8 372 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 SIT1Q9Y3P8 196 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 MYOFQ9NZM1 2061 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 COL4A3Q01955 1670 aa6.52□□□□□ -1.37
LTBR-212ENST00000543542 KIAA1549LQ6ZVL6 1849 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 A0A0A6YYK5 440 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 A0A1B0GVM2 712 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 H3BRJ5 948 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CACNG3O60359 315 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 CLDN11O75508 207 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 LUC7L3O95232 432 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 KAT7O95251 611 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 PDGFBP01127 241 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 EGFP01133 1207 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 PENKP01210 267 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 DCNP07585 359 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 KRT7P08729 469 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 POLR2EP19388 210 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 COMTP21964 271 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 HOXD9P28356 352 aaPredicted RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 EPHB2P29323 1055 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 OR1E1P30953 314 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 ARL4AP40617 200 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 OPRD1P41143 372 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 EIF2DP41214 584 aaKnown RBP6.51□□□□□ -1.37
LTBR-212ENST00000543542 GRIA2P42262 883 aa6.51□□□□□ -1.37
LTBR-212ENST00000543542 SLC1A1P43005 524 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms