RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 N4BP2L1Q5TBK1 243 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 TRIM68Q6AZZ1 485 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 LIMS2Q7Z4I7 341 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 TREML1Q86YW5 311 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 WDR75Q8IWA0 830 aaKnown RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 ZC3H15Q8WU90 426 aaKnown RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 P2RY11Q96G91 374 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 FAM96AQ9H5X1 160 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 ZNF395Q9H8N7 513 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 CDHR5Q9HBB8 845 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 MARCOQ9UEW3 520 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 SUFUQ9UMX1 484 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 F5H423 210 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 TPP1O14773 563 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 SPTLC1O15269 473 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 KRT36O76013 467 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 CYP2C9P11712 490 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 KCNE1P15382 129 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 IRX4P78413 519 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 ADIGQ0VDE8 80 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 PAFAH1B3Q15102 231 aaKnown RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 INSCQ1MX18 579 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 DCAF6Q58WW2 860 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 SPANXN3Q5MJ09 141 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 PIGZQ86VD9 579 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 RASSF3Q86WH2 238 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 CCNYQ8ND76 341 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 HNRNPABQ99729 332 aaKnown RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 CCDC106Q9BWC9 280 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 IGSF9Q9P2J2 1179 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 TXNDC16Q9P2K2 825 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 CORO1CQ9ULV4 474 aaPredicted RBP13.86□□□□□ -0.19
PPME1-208ENST00000543525 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 SLC45A1Q9Y2W3 748 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 NRCAMQ92823 1304 aa13.86□□□□□ -0.19
PPME1-208ENST00000543525 SCN4AP35499 1836 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 F8W8V4 182 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PDHXO00330 501 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PLIN3O60664 434 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 SMNDC1O75940 238 aaKnown RBP eCLIP13.85□□□□□ -0.194e-6■■□□□ 13.2
PPME1-208ENST00000543525 POLBP06746 335 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 SMIM10L2AP0DMW4 78 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 SMIM10L2BP0DMW5 78 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PSMB4P28070 264 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 CPA2P48052 419 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 ALDH18A1P54886 795 aaKnown RBP13.85□□□□□ -0.19
PPME1-208ENST00000543525 SESN3P58005 492 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PDE1BQ01064 536 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 RCN2Q14257 317 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 TRIP11Q15643 1979 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 XKR4Q5GH76 650 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 MBLAC2Q68D91 279 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 C16orf46Q6P387 395 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 ZCCHC23Q6ZST2 131 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 NET1Q7Z628 596 aaPredicted RBP13.85□□□□□ -0.19
PPME1-208ENST00000543525 SCUBE1Q8IWY4 988 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 UNC5BQ8IZJ1 945 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 NME8Q8N427 588 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 TOP6BLQ8N6T0 577 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 B3GALNT2Q8NCR0 500 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PPP4R1Q8TF05 950 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 ARNTL2Q8WYA1 636 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 KCTD13Q8WZ19 329 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PGBD4Q96DM1 585 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 ZNF333Q96JL9 665 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 FAM161BQ96MY7 647 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 NPY6RQ99463 290 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 FAM167BQ9BTA0 163 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 LRRC4Q9HBW1 653 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 KLK14Q9P0G3 267 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 STX18Q9P2W9 335 aaKnown RBP13.85□□□□□ -0.19
PPME1-208ENST00000543525 ZNF212Q9UDV6 495 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 GJD2Q9UKL4 321 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 EMCNQ9ULC0 261 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 PIN4Q9Y237 131 aaKnown RBP13.85□□□□□ -0.19
PPME1-208ENST00000543525 DNAJC16Q9Y2G8 782 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 NR2E3Q9Y5X4 410 aa13.85□□□□□ -0.19
PPME1-208ENST00000543525 EEF2KO00418 725 aaKnown RBP13.84□□□□□ -0.19
PPME1-208ENST00000543525 CAPN9O14815 690 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 CREB3O43889 395 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 KLHL2O95198 593 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 ALDOAP04075 364 aaKnown RBP13.84□□□□□ -0.19
PPME1-208ENST00000543525 SERPINE1P05121 402 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 ITGA2BP08514 1039 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 GRK2P25098 689 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 TKTP29401 623 aaKnown RBP13.84□□□□□ -0.19
PPME1-208ENST00000543525 ABL2P42684 1182 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 SLC1A6P48664 564 aa13.84□□□□□ -0.19
PPME1-208ENST00000543525 RPL10AP62906 217 aaKnown RBP13.84□□□□□ -0.19
PPME1-208ENST00000543525 CRADDP78560 199 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms