RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 LRRC71Q8N4P6 559 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ANKRD53Q8N9V6 530 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 OR5M3Q8NGP4 307 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 OR14K1Q8NGZ2 314 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 MAFAQ8NHW3 353 aaPredicted RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ARNTL2Q8WYA1 636 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 KAT5Q92993 513 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 MTFMTQ96DP5 389 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CDK5RAP3Q96JB5 506 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CLPTM1LQ96KA5 538 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 RPL10LQ96L21 214 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 MTMR9Q96QG7 549 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 EIF2AK1Q9BQI3 630 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 LXNQ9BS40 222 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 SARGQ9BW04 601 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 EPC1Q9H2F5 836 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 TUFT1Q9NNX1 390 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 CHST12Q9NRB3 414 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 RGS18Q9NS28 235 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ANKEF1Q9NU02 776 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 DACT1Q9NYF0 836 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 SUCLA2Q9P2R7 463 aaPredicted RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 PUF60Q9UHX1 559 aaKnown RBP5.9□□□□□ -1.46
CPSF7-220ENST00000541963 ST3GAL5Q9UNP4 418 aa5.9□□□□□ -1.46
CPSF7-220ENST00000541963 TET1Q8NFU7 2136 aa5.9□□□□□ -1.47
CPSF7-220ENST00000541963 EVPLQ92817 2033 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 IGKV6-21A0A0C4DH24 114 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 LINC01553A4QN01 128 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 FAM227AF5H4B4 570 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 STBD1O95210 358 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 RB1P06400 928 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 MYBP10242 640 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 SFPQP23246 707 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 GPC3P51654 580 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 SLURP1P55000 103 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 NPEPPSP55786 919 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 CYP4A11Q02928 519 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 TFDP1Q14186 410 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 BTG3Q14201 252 aaPredicted RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 MXD4Q14582 209 aaPredicted RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 LLGL1Q15334 1064 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 TCTN1Q2MV58 587 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 DARS2Q6PI48 645 aaKnown RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 C11orf96Q7Z7L8 435 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 RHPN2Q8IUC4 686 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 LINC01465Q8N7H1 131 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 OR2I1PQ8NGU4 316 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 PSPC1Q8WXF1 523 aaKnown RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 PKNOX2Q96KN3 472 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 CGRRF1Q99675 332 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 ADAM2Q99965 735 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 HSD17B14Q9BPX1 270 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 POLR3CQ9BUI4 534 aaPredicted RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 C12orf65Q9H3J6 166 aaKnown RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 ELAC1Q9H777 363 aaKnown RBP5.89□□□□□ -1.47
CPSF7-220ENST00000541963 CERS4Q9HA82 394 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 ATP6V0A4Q9HBG4 840 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 ERVK-5Q9HDB9 667 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 RGL1Q9NZL6 768 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 LRWD1Q9UFC0 647 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 USP25Q9UHP3 1055 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 WDR81Q562E7 1941 aa5.89□□□□□ -1.47
CPSF7-220ENST00000541963 GBF1Q92538 1859 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 MICAL3Q7RTP6 2002 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 A0A087WZ62 844 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 TEX33O43247 280 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 ITGA10O75578 1167 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 TUSC2O75896 110 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 BMP15O95972 392 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 ZBED1O96006 694 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 DARSP14868 501 aaKnown RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 RPA1P27694 616 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 HTR1BP28222 390 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CCT6AP40227 531 aaKnown RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 PRPHP41219 470 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 RAC3P60763 192 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 FAM193AP78312 1265 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 FAM189BP81408 668 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 POU5F1BQ06416 359 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 GPM6BQ13491 265 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CUL4AQ13619 759 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 NFYCQ13952 458 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 SPOUT1Q5T280 376 aaKnown RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 KRT79Q5XKE5 535 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 PLA2G4FQ68DD2 849 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CHST15Q7LFX5 561 aaPredicted RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CATSPER4Q7RTX7 472 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 TMCO2Q7Z6W1 182 aaPredicted RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 FAM228AQ86W67 206 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CATSPER3Q86XQ3 398 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CMTM4Q8IZR5 234 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 LGI4Q8N135 537 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 MCPH1Q8NEM0 835 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 PPP1R35Q8TAP8 253 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 PRPF31Q8WWY3 499 aaKnown RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 PPM1EQ8WY54 764 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 RSPH1Q8WYR4 309 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms