RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RNASELQ05823 741 aaKnown RBP4.68□□□□□ -1.66
SNHG1-217ENST00000541578 CHRNDQ07001 517 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 MYO1EQ12965 1108 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 CTXN3Q4LDR2 81 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 TREML2Q5T2D2 321 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 ZKSCAN2Q63HK3 967 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 FCRLBQ6BAA4 426 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 KRT27Q7Z3Y8 459 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 CPOQ8IVL8 374 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 HERC6Q8IVU3 1022 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 ANKRD44Q8N8A2 993 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 HASPINQ8TF76 798 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 SNRNP27Q8WVK2 155 aaKnown RBP4.68□□□□□ -1.66
SNHG1-217ENST00000541578 UBE2Q2Q8WVN8 375 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 BARD1Q99728 777 aaKnown RBP4.68□□□□□ -1.66
SNHG1-217ENST00000541578 SDF4Q9BRK5 362 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 OSBPL5Q9H0X9 879 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-217ENST00000541578 PI4KBQ9UBF8 816 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 NRBP1Q9UHY1 535 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 TBX20Q9UMR3 447 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 DAPP1Q9UN19 280 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 SH2B3Q9UQQ2 575 aa4.68□□□□□ -1.66
SNHG1-217ENST00000541578 MRPS17Q9Y2R5 130 aaKnown RBP4.68□□□□□ -1.66
SNHG1-217ENST00000541578 ARHGEF12Q9NZN5 1544 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SCAPERQ9BY12 1400 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 MANSC4A6NHS7 340 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TARM1B6A8C7 271 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TISP43B9A030 160 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 QSOX1O00391 747 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 CD3EAPO15446 510 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SEPT4O43236 478 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ANP32CO43423 234 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TIPRLO75663 272 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 LARGE1O95461 756 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 DDX58O95786 925 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 IL6RP08887 468 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 HNRNPA1P09651 372 aaKnown RBP eCLIP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 CDK4P11802 303 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 CPA1P15085 419 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 KCNA3P22001 575 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 RBL1P28749 1068 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 PCSK6P29122 969 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 EPHA3P29320 983 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 CYP2C18P33260 490 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 HSPA1LP34931 641 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 PGM1P36871 562 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 LIPAP38571 399 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 PAFAH1B1P43034 410 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 GATMP50440 423 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TUBP50607 506 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 PDE1AP54750 535 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SP2Q02086 613 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SRSF4Q08170 494 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 CCNIQ14094 377 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 KRT32Q14532 448 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 GRM4Q14833 912 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 GPR68Q15743 365 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 AARS2Q5JTZ9 985 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 MAP3K21Q5TCX8 1036 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ATG16L1Q676U5 607 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SUMO4Q6EEV6 95 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ABLIM2Q6H8Q1 611 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ANKRD16Q6P6B7 361 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 CLEC9AQ6UXN8 241 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SYNE3Q6ZMZ3 975 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SYT13Q7L8C5 426 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 WDR53Q7Z5U6 358 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 SRRM1Q8IYB3 904 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TMTC2Q8N394 836 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 USP38Q8NB14 1042 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 C1orf131Q8NDD1 294 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 OR1N1Q8NGS0 311 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 MBD3L2Q8NHZ7 208 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 NOC3LQ8WTT2 800 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TMEM171Q8WVE6 324 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ATG4AQ8WYN0 398 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ST8SIA4Q92187 359 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ZUFSPQ96AP4 578 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 GLOD4Q9HC38 313 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 GBA2Q9HCG7 927 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 LIN7CQ9NUP9 197 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TMLHEQ9NVH6 421 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 ORC3Q9UBD5 711 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 NDRG4Q9ULP0 352 aaKnown RBP4.67□□□□□ -1.66
SNHG1-217ENST00000541578 TNFRSF18Q9Y5U5 241 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 RAPGEF6Q8TEU7 1601 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 AOX1Q06278 1338 aa4.67□□□□□ -1.66
SNHG1-217ENST00000541578 FRMPD1Q5SYB0 1578 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 HECW1Q76N89 1606 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 A1L4Q6 167 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 TFRCP02786 760 aaKnown RBP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 PRKCGP05129 697 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 MYCLP12524 364 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-217ENST00000541578 HGFP14210 728 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 CD19P15391 556 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 PDE6CP51160 858 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 CLCN2P51788 898 aa4.66□□□□□ -1.66
SNHG1-217ENST00000541578 PNLIPRP1P54315 467 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms