RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 BNIP2Q12982 314 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 POLD3Q15054 466 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 ADHFE1Q8IWW8 467 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 MYO1HQ8N1T3 1032 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 ATP6V0D2Q8N8Y2 350 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 ZSCAN18Q8TBC5 510 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 CAPSLQ8WWF8 208 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 TRIM8Q9BZR9 551 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 CIDEBQ9UHD4 219 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 SQORQ9Y6N5 450 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 ASTN2O75129 1339 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 FSCN2O14926 492 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 RAD51BO15315 384 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 CAPN1P07384 714 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 CCNHP51946 323 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 NEK3P51956 506 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 FIG4Q92562 907 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 MRPL48Q96GC5 212 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 DKK3Q9UBP4 350 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 KLHL20Q9Y2M5 609 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 IPPQ9Y573 584 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 ITGAVP06756 1048 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 EIF4BP23588 611 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 FICDQ9BVA6 458 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 SPRTNQ9H040 489 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 GPRC5CQ9NQ84 441 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 R3HDM2Q9Y2K5 976 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 MAGEC1O60732 1142 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 GLP2RO95838 553 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 PSMC6P62333 389 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 CACNB2Q08289 660 aaPredicted RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 COX10Q12887 443 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 MTMR2Q13614 643 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 TTC7BQ86TV6 843 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 EPS8L1Q8TE68 723 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 FAM151AQ8WW52 585 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 POP1Q99575 1024 aaKnown RBP15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 XPNPEP3Q9NQH7 507 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 RGS18Q9NS28 235 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 CRLS1Q9UJA2 301 aa15.29■□□□□ 0.04
SMARCA4-207ENST00000541122 SNPHO15079 494 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 GSC2O15499 205 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 IDH3BO43837 385 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 PIGNO95427 931 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CRTAMO95727 393 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 NR6A1Q15406 480 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CYP4Z2PQ8N1L4 340 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 EMC1Q8N766 993 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 DPY30Q9C005 99 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SERHL2Q9H4I8 314 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 POLR1BQ9H9Y6 1135 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SPAG4Q9NPE6 437 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SERHLQ9NQF3 203 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SPASTQ9UBP0 616 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 MAP3K6O95382 1288 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 FESP07332 822 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 MGAT1P26572 445 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 PSME3P61289 254 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 BNC1Q01954 994 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SPIRE1Q08AE8 756 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 EFCAB12Q6NXP0 572 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 IKBIPQ70UQ0 350 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CHST13Q8NET6 341 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 BLOC1S5Q8TDH9 187 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SPATA17Q96L03 361 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 TCF12Q99081 682 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CINPQ9BW66 212 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 ROGDIQ9GZN7 287 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 PSMD13Q9UNM6 376 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 TK2O00142 265 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 GH1P01241 217 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 PAEPP09466 180 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 RAB15P59190 212 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 NAA20P61599 178 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 LPIN1Q14693 890 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SYTL1Q8IYJ3 562 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 GMCL1P1Q8NEA9 526 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 KBTBD8Q8NFY9 601 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 LNX1Q8TBB1 728 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 MBOAT7Q96N66 472 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SPATA16Q9BXB7 569 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 ERAP1Q9NZ08 941 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SEC24AO95486 1093 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CYP1A1P04798 512 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 PSMA3P25788 255 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 NFIXQ14938 502 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 BRINP3Q76B58 766 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 CCDC167Q9P0B6 97 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 LIMD1Q9UGP4 676 aa15.28■□□□□ 0.04
SMARCA4-207ENST00000541122 PPRC1Q5VV67 1664 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms