RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 SMPD4Q9NXE4 827 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 MARCH2Q9P0N8 246 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 CFAP97Q9P2B7 532 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 WNT16Q9UBV4 365 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.99□□□□□ -0.65
ATL3-204ENST00000540699 NAALADL1Q9UQQ1 740 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 V9GYY5 206 aaPredicted RBP10.99□□□□□ -0.65
ATL3-204ENST00000540699 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
ATL3-204ENST00000540699 H0Y858 1186 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 SLC9A3R1O14745 358 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 STC2O76061 302 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 NCAM1P13591 858 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 IL1R2P27930 398 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 MATKP42679 507 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 KPNA1P52294 538 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 RNASE9P60153 205 aaKnown RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 TUBB4BP68371 445 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 ELF2Q15723 593 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 C15orf59Q2T9L4 293 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 EML3Q32P44 896 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 TEX35Q5T0J7 233 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 SEL1L2Q5TEA6 688 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 OTUD1Q5VV17 481 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 SYPL2Q5VXT5 272 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 ASTLQ6HA08 431 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 MIB1Q86YT6 1006 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 YAF2Q8IY57 180 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 DEFB106AQ8N104 65 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 EXD1Q8NHP7 514 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 DQX1Q8TE96 717 aaKnown RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 OSCP1Q8WVF1 389 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 UBXN4Q92575 508 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 CENPIQ92674 756 aaPredicted RBP10.98□□□□□ -0.65
ATL3-204ENST00000540699 FAM149B1Q96BN6 582 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 PLD4Q96BZ4 506 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 OTUB2Q96DC9 234 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 SLC39A13Q96H72 371 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 PEBP4Q96S96 227 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 BRD9Q9H8M2 597 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 HPS4Q9NQG7 708 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 RRN3Q9NYV6 651 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 RASAL2Q9UJF2 1139 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATL3-204ENST00000540699 GVINP1Q7Z2Y8 2422 aa10.98□□□□□ -0.65
ATL3-204ENST00000540699 SHISA7A6NL88 538 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 DYNC1I1O14576 645 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 IRAK2O43187 625 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 LATS1O95835 1130 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 FGGP02679 453 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 KLKB1P03952 638 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 GLULP15104 373 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 MIPP30301 263 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 SDC4P31431 198 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 NOS2P35228 1153 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 PTPN7P35236 360 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 HDAC4P56524 1084 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 SIX1Q15475 284 aaPredicted RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 ATP13A4Q4VNC1 1196 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 SH3PXD2AQ5TCZ1 1133 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 CWF19L1Q69YN2 538 aaKnown RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 ANKS1BQ7Z6G8 1248 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 SLC13A5Q86YT5 568 aaPredicted RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 FAM217AQ8IXS0 508 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 ATP2A3Q93084 1043 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 AZIN2Q96A70 460 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 PGAP3Q96FM1 320 aaPredicted RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 ZFYVE19Q96K21 471 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 CFAP57Q96MR6 1250 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 SERPINB11Q96P15 392 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 NAP1L3Q99457 506 aaPredicted RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 NPY6RQ99463 290 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 NCAPGQ9BPX3 1015 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 HERPUD2Q9BSE4 406 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 DCLK3Q9C098 648 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 MFSD1Q9H3U5 465 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 ANKZF1Q9H8Y5 726 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 TMEM51Q9NW97 253 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 DUS2Q9NX74 493 aaKnown RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 DDX56Q9NY93 547 aaKnown RBP10.97□□□□□ -0.65
ATL3-204ENST00000540699 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.97□□□□□ -0.65
ATL3-204ENST00000540699 TBC1D14Q9P2M4 693 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 SFMBT1Q9UHJ3 866 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 STOML2Q9UJZ1 356 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 TLR6Q9Y2C9 796 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 ZNF510Q9Y2H8 683 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 WNT6Q9Y6F9 365 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
ATL3-204ENST00000540699 TCRBV7S2A1N4TA0A589 114 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 SLC12A8A0AV02 714 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 KRBA1A5PL33 1030 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 OTOL1A6NHN0 477 aaPredicted RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 C3orf70A6NLC5 250 aaPredicted RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 CCDC188H7C350 402 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 GFRA2O00451 464 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 CAPN9O14815 690 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 MSI1O43347 362 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms