RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 FASTKQ14296 549 aaKnown RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 TMC7Q7Z402 723 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 KCNMB4Q86W47 210 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ATPAF2Q8N5M1 289 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 RDH11Q8TC12 318 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CASP10Q92851 521 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SKA1Q96BD8 255 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SEMA6AQ9H2E6 1030 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 TSPAN16Q9UKR8 245 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ATP11BQ9Y2G3 1177 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 USP54Q70EL1 1684 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 A0A0A0MRY4 1105 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 HDAC3O15379 428 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 RBP1P09455 135 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 HMGCS2P54868 508 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 NAT8LQ8N9F0 302 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 LMO3Q8TAP4 145 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ZSCAN18Q8TBC5 510 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SGF29Q96ES7 293 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SPATA13Q96N96 652 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 BCAS3Q9H6U6 928 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 COPG2Q9UBF2 871 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 NENFQ9UMX5 172 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 AAR2Q9Y312 384 aaKnown RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 PIGNO95427 931 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CRABP2P29373 138 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 TCF7P36402 384 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 TRPC1P48995 793 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 USP46P62068 366 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 KLF10Q13118 480 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 LPIN1Q14693 890 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 PACS1Q6VY07 963 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CHST13Q8NET6 341 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SLC35B2Q8TB61 432 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 DENND1AQ8TEH3 1009 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.288e-8■■■■■ 53
DNMT1-203ENST00000540357 DACH2Q96NX9 599 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CLK4Q9HAZ1 481 aaKnown RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 TRPC7Q9HCX4 862 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CCDC189A1A4V9 331 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CLOCKO15516 846 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 FAM155BO75949 473 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CYP2C9P11712 490 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 SLC6A3Q01959 620 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 UGCGQ16739 394 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ZC3H12AQ5D1E8 599 aaKnown RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ISLR2Q6UXK2 745 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 ZNF280CQ8ND82 737 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 PTCD3Q96EY7 689 aaKnown RBP13.32□□□□□ -0.28
DNMT1-203ENST00000540357 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
DNMT1-203ENST00000540357 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 DYTNA2CJ06 578 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 MRASO14807 208 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 DAB1O75553 588 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 ZNF23P17027 643 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 TPSB2P20231 275 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 HIRAP54198 1017 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 NSUN2Q08J23 767 aaKnown RBP eCLIP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 TPSAB1Q15661 275 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 EFCAB12Q6NXP0 572 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 FRA10AC1Q70Z53 315 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 MYLK4Q86YV6 388 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 PLD3Q8IV08 490 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 SLC22A9Q8IVM8 553 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 EFCAB3Q8N7B9 438 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 SLC4A5Q9BY07 1137 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 RNF103O00237 685 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 GPX6P59796 221 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 RBBP7Q16576 425 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 CCDC117Q8IWD4 279 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 KIAA2013Q8IYS2 634 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 C1orf50Q9BV19 199 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 COG4Q9H9E3 785 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 ATAD3AQ9NVI7 634 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 HBP1O60381 514 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 YY1P25490 414 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 MLH1P40692 756 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 SLC18A2Q05940 514 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 TTC30AQ86WT1 665 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 NIPA2Q8N8Q9 360 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 OR5B17Q8NGF7 314 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 ACTRT2Q8TDY3 377 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 CERS2Q96G23 380 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 PANX3Q96QZ0 392 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 NACA2Q9H009 215 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 PCDHGC3Q9UN70 934 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms