RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NME3Q13232 169 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TNFAIP1Q13829 316 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 COG2Q14746 738 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SNRNP35Q16560 246 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF667Q5HYK9 610 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ANKRD13AQ8IZ07 590 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SNX31Q8N9S9 440 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PCYOX1LQ8NBM8 494 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ZSWIM2Q8NEG5 633 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 MTMR9Q96QG7 549 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 NRBP2Q9NSY0 501 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RIC1Q4ADV7 1423 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 UBR1Q8IWV7 1749 aa5.52□□□□□ -1.52
PTPRD-213ENST00000537002 HEATR9A2RTY3 570 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 INO80B-WBP1J3KQ70 363 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 BUD23O43709 281 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 NBNO60934 754 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SIN3BO75182 1162 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ZSCAN5DPP0CG00 497 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DHRS4L1P0CG22 281 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TBXAS1P24557 533 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 NFKBIAP25963 317 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ZFP28Q8NHY6 868 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ETNPPLQ8TBG4 499 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TMEM174Q8WUU8 243 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ATL1Q8WXF7 558 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TUBGCP3Q96CW5 907 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RMDN1Q96DB5 314 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DHRS1Q96LJ7 313 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 WRNIP1Q96S55 665 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 C17orf80Q9BSJ5 609 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RTKNQ9BST9 563 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ILKAPQ9H0C8 392 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 EHD1Q9H4M9 534 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ERVK-5Q9HDB9 667 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PAK5Q9P286 719 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TRDMT1O14717 391 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DCXO43602 365 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DLDP09622 509 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PAMP19021 973 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 EMP3P54852 163 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TXNL4AP83876 142 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 EPS8Q12929 822 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF846Q147U1 533 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 FAM47CQ5HY64 1035 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PID1Q7Z2X4 250 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TMC7Q7Z402 723 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TREML1Q86YW5 311 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ARHGEF19Q8IW93 802 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RAB2BQ8WUD1 216 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MYH11P35749 1972 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PCP4L1A6NKN8 68 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TRPC5OSA6NMA1 111 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 KMOO15229 486 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TPPPO94811 219 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MAP3K6O95382 1288 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 M6PRP20645 277 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 AMPD1P23109 780 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ELK3P41970 407 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 GLRBP48167 497 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ADAM17P78536 824 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 STX5Q13190 355 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PRKD1Q15139 912 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 C6orf183Q5T699 404 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 C12orf60Q5U649 245 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TUBA3EQ6PEY2 450 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TTC7BQ86TV6 843 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DNAJC19Q96DA6 116 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PCDH12Q9NPG4 1184 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ARMC1Q9NVT9 282 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MAD2L2Q9UI95 211 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SERPINB13Q9UIV8 391 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DUOX1Q9NRD9 1551 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LTN1O94822 1766 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PXDNQ92626 1479 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ERVV-1B6SEH8 477 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 KBTBD13C9JR72 458 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TOMM70O94826 608 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ETFBP38117 255 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RAP1GAPP47736 663 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 AQP4P55087 323 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 KCNK10P57789 538 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 TGFB2P61812 414 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 EIF2B5Q13144 721 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 NCOA4Q13772 614 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LDLRAP1Q5SW96 308 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 POLNQ7Z5Q5 900 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 PTAR1Q7Z6K3 402 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 DHFR2Q86XF0 187 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ATP6V0D2Q8N8Y2 350 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 FNIP1Q8TF40 1166 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 EPS8L2Q9H6S3 715 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 WNK3Q9BYP7 1800 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 RGS5O15539 181 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 MED24O75448 989 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LYPLA1O75608 230 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 LDHAP00338 332 aaKnown RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 ATP6V1B2P21281 511 aa5.52□□□□□ -1.53
PTPRD-213ENST00000537002 SPRP35270 261 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-213ENST00000537002 NEK3P51956 506 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms