RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 RCOR3Q9P2K3 495 aaPredicted RBP5.99□□□□□ -1.45
CHD4-206ENST00000536999 ARHGAP28Q9P2N2 729 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 RSL24D1Q9UHA3 163 aaKnown RBP5.99□□□□□ -1.45
CHD4-206ENST00000536999 ZNHIT2Q9UHR6 403 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 CDH22Q9UJ99 828 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 ANKRD6Q9Y2G4 727 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 TELO2Q9Y4R8 837 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 SPTBN4Q9H254 2564 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 MYO9BQ13459 2157 aa5.99□□□□□ -1.45
CHD4-206ENST00000536999 A0A088AWK7 358 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 A0A0B4J269 797 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 FAM159BA6NKW6 160 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TCP10L2B9ZVM9 353 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TRIM49D1C9J1S8 452 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 H7C0C1 242 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TXNDC9O14530 226 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TIMM44O43615 452 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 BUD23O43709 281 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 PRPSAP2O60256 369 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 E2F6O75461 281 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 GCATO75600 419 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ALDH1A2O94788 518 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 BAIAP3O94812 1187 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ZBED1O96006 694 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TNNC2P02585 160 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 CAPNS1P04632 268 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 POLBP06746 335 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 HNRNPCP07910 306 aaKnown RBP eCLIP5.98□□□□□ -1.45
CHD4-206ENST00000536999 SRGAP2CP0DJJ0 459 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 SRGAP2BP0DMP2 458 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ZNF23P17027 643 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PSMC3P17980 439 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ACO1P21399 889 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 ME2P23368 584 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 CCND2P30279 289 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 HMOX2P30519 316 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 SSTR1P30872 391 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 HOXA13P31271 388 aaPredicted RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 SPRP35270 261 aaPredicted RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 SCNN1AP37088 669 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ELK3P41970 407 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ATP5OP48047 213 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 SLC1A6P48664 564 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 HARS2P49590 506 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 CDK9P50750 372 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 ZNF132P52740 706 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 OAZ1P54368 228 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 OTUD4Q01804 1114 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 SF3A3Q12874 501 aaKnown RBP eCLIP5.98□□□□□ -1.45
CHD4-206ENST00000536999 TRIM32Q13049 653 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 MXD4Q14582 209 aaPredicted RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 NOMO1Q15155 1222 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 UGP2Q16851 508 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 CCDC92Q53HC0 331 aaPredicted RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 KRT80Q6KB66 452 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PRMT9Q6P2P2 845 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 DHRS4L2Q6PKH6 230 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 UGT2A3Q6UWM9 527 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 SH2D5Q6ZV89 423 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ZNF410Q86VK4 478 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 NT5DC4Q86YG4 428 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PGAM4Q8N0Y7 254 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PPM1NQ8N819 430 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PLEKHO2Q8TD55 490 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 DEPDC1BQ8WUY9 529 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 BADQ92934 168 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ANKRD36BP1Q96IX9 119 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 MPP4Q96JB8 637 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 FAM167AQ96KS9 214 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PLEKHG4BQ96PX9 1271 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 CPNE1Q99829 537 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 EBNA1BP2Q99848 306 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 TUBA1CQ9BQE3 449 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 FAM213AQ9BRX8 229 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TRIM56Q9BRZ2 755 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 ZNF670Q9BS34 389 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 TCHPQ9BT92 498 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 MRPL1Q9BYD6 325 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 TMEM39BQ9GZU3 492 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 UPF3AQ9H1J1 476 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 MUC13Q9H3R2 512 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 C10orf88Q9H8K7 445 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 CD320Q9NPF0 282 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PNPLA3Q9NST1 481 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 DNAJC17Q9NVM6 304 aaKnown RBP5.98□□□□□ -1.45
CHD4-206ENST00000536999 IGSF9Q9P2J2 1179 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 CCPG1Q9ULG6 757 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 POMPQ9Y244 141 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 LZTS1Q9Y250 596 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 MYRFQ9Y2G1 1151 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 ATP11BQ9Y2G3 1177 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 PCDHA11Q9Y5I1 949 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 IVNS1ABPQ9Y6Y0 642 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 EPG5Q9HCE0 2579 aa5.98□□□□□ -1.45
CHD4-206ENST00000536999 C15orf38-AP3S2A0A0A6YYH1 394 aa5.97□□□□□ -1.45
CHD4-206ENST00000536999 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.97□□□□□ -1.45
CHD4-206ENST00000536999 FAM237BA0A1B0GVD1 139 aa5.97□□□□□ -1.45
CHD4-206ENST00000536999 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.97□□□□□ -1.45
CHD4-206ENST00000536999 SH3PXD2BA1X283 911 aa5.97□□□□□ -1.45
CHD4-206ENST00000536999 TYW5A2RUC4 315 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms