RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 DDX43Q9NXZ2 648 aaKnown RBP17.7■□□□□ 0.42
BRCA2-204ENST00000530893 PTCH2Q9Y6C5 1203 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 NUMBLQ9Y6R0 609 aa17.7■□□□□ 0.42
BRCA2-204ENST00000530893 M0QZ92 97 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 MTSS1O43312 755 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 GLRA3O75311 464 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 POLBP06746 335 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 ACAT1P24752 427 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 NDUFV1P49821 464 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 MAP3K7CLP57077 242 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 DAOAP59103 153 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 PITX1P78337 314 aaPredicted RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 SEMA3BQ13214 749 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 NME3Q13232 169 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 CRYMQ14894 314 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 CHI3L2Q15782 390 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 PACS1Q6VY07 963 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 CRLF3Q8IUI8 442 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 ZNF567Q8N184 647 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 TRIM56Q9BRZ2 755 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 RNPEPL1Q9HAU8 725 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 CHST12Q9NRB3 414 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 ERI2A8K979 691 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 F9P00740 461 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 LMNAP02545 664 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 MGAT1P26572 445 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 PSMB4P28070 264 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 EPHB2P29323 1055 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 PURAQ00577 322 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 FSCN1Q16658 493 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 INSCQ1MX18 579 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 ARL13BQ3SXY8 428 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 SPANXN3Q5MJ09 141 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 RSRC1Q96IZ7 334 aaKnown RBP17.69■□□□□ 0.42
BRCA2-204ENST00000530893 SYT15Q9BQS2 421 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 CRTAC1Q9NQ79 661 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 DCDC2Q9UHG0 476 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 FBXW11Q9UKB1 542 aa17.69■□□□□ 0.42
BRCA2-204ENST00000530893 KPNA6O60684 536 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 FYNP06241 537 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 MRPS6P82932 125 aaKnown RBP17.68■□□□□ 0.42
BRCA2-204ENST00000530893 FRG1Q14331 258 aaKnown RBP17.68■□□□□ 0.42
BRCA2-204ENST00000530893 TLDC1Q6P9B6 456 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 SLC7A14Q8TBB6 771 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 PGBD4Q96DM1 585 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 ZFP42Q96MM3 310 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 MECRQ9BV79 373 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 ULBP1Q9BZM6 244 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 MMADHCQ9H3L0 296 aaPredicted RBP17.68■□□□□ 0.42
BRCA2-204ENST00000530893 WDR6Q9NNW5 1121 aaKnown RBP17.68■□□□□ 0.42
BRCA2-204ENST00000530893 THAP1Q9NVV9 213 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 CDH9Q9ULB4 789 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 DOCK3Q8IZD9 2030 aa17.68■□□□□ 0.42
BRCA2-204ENST00000530893 MYO18AQ92614 2054 aaKnown RBP17.68■□□□□ 0.42
BRCA2-204ENST00000530893 SYNJ2BP-COX16A0A087WUM0 186 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 FAM237BA0A1B0GVD1 139 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 AP1G2O75843 785 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 THP07101 528 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 MX2P20592 715 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 SESN2P58004 480 aaPredicted RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 BEX3Q00994 111 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 TBCCQ15814 346 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 KIAA0319Q5VV43 1072 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 PID1Q7Z2X4 250 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 FAM35AQ86V20 835 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 ENDOVQ8N8Q3 282 aaKnown RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 FBXO6Q9NRD1 293 aaPredicted RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 ARL8BQ9NVJ2 186 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 COX16Q9P0S2 106 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 SEPT10Q9P0V9 454 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 TXNDC16Q9P2K2 825 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 NR2E3Q9Y5X4 410 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 FCHO1O14526 889 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 NRP1O14786 923 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 ALDOAP04075 364 aaKnown RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 ERCC2P18074 760 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 RGS2P41220 211 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 TPI1P60174 286 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 PPIDQ08752 370 aaKnown RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 STX3Q13277 289 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 ACCSLQ4AC99 568 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 HFE2Q6ZVN8 426 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 GSTCDQ8NEC7 633 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 NSMCE1Q8WV22 266 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 VAT1Q99536 393 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 STN1Q9H668 368 aaKnown RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 LRRC40Q9H9A6 602 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 TMPRSS4Q9NRS4 437 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 FAM105AQ9NUU6 356 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 ZFATQ9P243 1243 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 KLHL8Q9P2G9 620 aaPredicted RBP17.67■□□□□ 0.42
BRCA2-204ENST00000530893 TRHDEQ9UKU6 1024 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 TRPV2Q9Y5S1 764 aa17.67■□□□□ 0.42
BRCA2-204ENST00000530893 YJEFN3A6XGL0 299 aa17.66■□□□□ 0.42
BRCA2-204ENST00000530893 GYG2O15488 501 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms