RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 WDR55Q9H6Y2 383 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 TRPC7Q9HCX4 862 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SYBUQ9NX95 663 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MID2Q9UJV3 735 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CHD4Q14839 1912 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 A8MX80 341 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 TREHO43280 583 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 METTL18O95568 372 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 EPHA3P29320 983 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 POU5F1Q01860 360 aaKnown RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 MAP7Q14244 749 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 SLC45A4Q5BKX6 768 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 LRRC38Q5VT99 294 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 ANGPTL8Q6UXH0 198 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 STK32AQ8WU08 396 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 B3GALT6Q96L58 329 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 OR12D3Q9UGF7 316 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 KIAA1257Q9ULG3 409 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 RRN3P2A6NIE6 340 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 AKAP10O43572 662 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 NFKB1P19838 968 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 SP100P23497 879 aaPredicted RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 ASPAP45381 313 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 DNAL1Q4LDG9 190 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 MFSD3Q96ES6 412 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 UPF3AQ9H1J1 476 aaKnown RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 RNPEPL1Q9HAU8 725 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 MPP6Q9NZW5 540 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 RABGEF1Q9UJ41 708 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 PTPN1P18031 435 aaKnown RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 XRCC4Q13426 336 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 KCNMB4Q86W47 210 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 IGDCC3Q8IVU1 814 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 PCDH20Q8N6Y1 951 aaKnown RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 TDRD5Q8NAT2 981 aaKnown RBP12.67□□□□□ -0.38
SCN3B-206ENST00000530277 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 CMTM5Q96DZ9 223 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 EXOC2Q96KP1 924 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
SCN3B-206ENST00000530277 MFSD11O43934 449 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 SNX2O60749 519 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 EDN1P05305 212 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 KYAT1Q16773 422 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 LDB1Q86U70 411 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 C10orf107Q8IVU9 208 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 GSTCDQ8NEC7 633 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 TEKT4Q8WW24 435 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 TINF2Q9BSI4 451 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 TSPYL2Q9H2G4 693 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 ABHD16BQ9H3Z7 469 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CCDC167Q9P0B6 97 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 RBPJLQ9UBG7 517 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 APPL1Q9UKG1 709 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 FAF1Q9UNN5 650 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CXCL11O14625 94 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 FGFR3P22607 806 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CCR1P32246 355 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 TMED1Q13445 227 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 MFSD10Q14728 455 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 THEMIS2Q5TEJ8 643 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 NAPEPLDQ6IQ20 393 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 FRA10AC1Q70Z53 315 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CD101Q93033 1021 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 NCLNQ969V3 563 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 DENND2DQ9H6A0 471 aaPredicted RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CDY2AQ9Y6F7 541 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CDY1Q9Y6F8 540 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 C9JVG2 144 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 SMIM10L2AP0DMW4 78 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 SMIM10L2BP0DMW5 78 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 HNRNPLP14866 589 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 ITGB6P18564 788 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 NELFEP18615 380 aaKnown RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 FDFT1P37268 417 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 MBTD1Q05BQ5 628 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 TBL3Q12788 808 aaKnown RBP12.66□□□□□ -0.38
SCN3B-206ENST00000530277 NOMO1Q15155 1222 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CYP1B1Q16678 543 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 TAGLN3Q9UI15 199 aa12.66□□□□□ -0.38
SCN3B-206ENST00000530277 B4GALT4O60513 344 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 PIGNO95427 931 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CSH1P0DML2 217 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CSH2P0DML3 217 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms