RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 FAM181AQ8N9Y4 354 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 ZNF578Q96N58 590 aaPredicted RBP10.88□□□□□ -0.67
COPB1-207ENST00000529866 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 USP3Q9Y6I4 520 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 NUMA1Q14980 2115 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 ATMQ13315 3056 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 COL5A1P20908 1838 aaPredicted RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 PPP6R2O75170 966 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 VNN1O95497 513 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 YEATS4O95619 227 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 LATS1O95835 1130 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 ASS1P00966 412 aaKnown RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 WNT1P04628 370 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 POLR2EP19388 210 aaKnown RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 RXRGP48443 463 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 GALCP54803 685 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 SLC8A3P57103 927 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 NXPH1P58417 271 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 YWHAGP61981 247 aaKnown RBP eCLIP10.87□□□□□ -0.67
COPB1-207ENST00000529866 INSM1Q01101 510 aaPredicted RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 SHBQ15464 509 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 TRIP4Q15650 581 aaPredicted RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 KNOP1Q1ED39 458 aaKnown RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 ZACNQ401N2 412 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 ARHGAP40Q5TG30 622 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 MBLAC2Q68D91 279 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 UNC13DQ70J99 1090 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 ADIPOR2Q86V24 386 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 GRAMD1CQ8IYS0 662 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 LSMEM2Q8N112 164 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 OR2T34Q8NGX1 318 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 SNX21Q969T3 373 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 ELMO3Q96BJ8 720 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 NAF1Q96HR8 494 aaKnown RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 SERAC1Q96JX3 654 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 OMDQ99983 421 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 DUSP16Q9BY84 665 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 RSPH9Q9H1X1 276 aaPredicted RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 ERVMER34-1Q9H9K5 563 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 CYP3A43Q9HB55 503 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 OLA1Q9NTK5 396 aaKnown RBP10.87□□□□□ -0.67
COPB1-207ENST00000529866 FZD4Q9ULV1 537 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 CKAP5Q14008 2032 aa10.87□□□□□ -0.67
COPB1-207ENST00000529866 SHROOM3Q8TF72 1996 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 MUC22E2RYF6 1773 aaPredicted RBP10.86□□□□□ -0.67
COPB1-207ENST00000529866 A0A1W2PP55 124 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 A0A1W2PR77 199 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 CYSRT1A8MQ03 144 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 TLR4O00206 839 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 SLC28A2O43868 658 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 MAGEC1O60732 1142 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 RNASEH2AO75792 299 aaKnown RBP10.86□□□□□ -0.67
COPB1-207ENST00000529866 MT-CO3P00414 261 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 SLFN14P0C7P3 912 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 ACP1P24666 158 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 CCR5P51681 352 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 EHHADHQ08426 723 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 CST6Q15828 149 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 ADGRF1Q5T601 910 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 KDM7AQ6ZMT4 941 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 FMNL3Q8IVF7 1028 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 DHX40Q8IX18 779 aaKnown RBP10.86□□□□□ -0.67
COPB1-207ENST00000529866 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 PLEKHO2Q8TD55 490 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 KCNE4Q8WWG9 221 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 TWNKQ96RR1 684 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 MAGEF1Q9HAY2 307 aa10.86□□□□□ -0.67
COPB1-207ENST00000529866 HBS1LQ9Y450 684 aaKnown RBP10.86□□□□□ -0.67
COPB1-207ENST00000529866 TYW5A2RUC4 315 aaKnown RBP10.85□□□□□ -0.67
COPB1-207ENST00000529866 MID1O15344 667 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 CUTAO60888 179 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 WISP1O95388 367 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 F13A1P00488 732 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 ZSCAN22P10073 491 aaPredicted RBP10.85□□□□□ -0.67
COPB1-207ENST00000529866 CD58P19256 250 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 ERVPABLB-1P60509 514 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 DAB2P98082 770 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 OVGP1Q12889 678 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 HNRNPA1L2Q32P51 320 aaKnown RBP10.85□□□□□ -0.67
COPB1-207ENST00000529866 KMT5BQ4FZB7 885 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 MPP7Q5T2T1 576 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 SPOPLQ6IQ16 392 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 NAPEPLDQ6IQ20 393 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 SV2AQ7L0J3 742 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 KIAA0907Q7Z7F0 614 aaPredicted RBP10.85□□□□□ -0.67
COPB1-207ENST00000529866 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 RNF139Q8WU17 664 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 HIC2Q96JB3 615 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 DEPDC7Q96QD5 511 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 IRX2Q9BZI1 471 aaPredicted RBP10.85□□□□□ -0.67
COPB1-207ENST00000529866 NIF3L1Q9GZT8 377 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 NEUROG2Q9H2A3 272 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 CPNE5Q9HCH3 593 aa10.85□□□□□ -0.67
COPB1-207ENST00000529866 THSD1Q9NS62 852 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms