RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CKMT1AP12532 417 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 HOXD9P28356 352 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 RBMS1P29558 406 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 HARS2P49590 506 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 SERINC3Q13530 473 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 MBLAC2Q68D91 279 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 CLEC20AQ6ZU45 233 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 SPATS2Q86XZ4 545 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 SLC25A45Q8N413 288 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 ZNF366Q8N895 744 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 KDM1BQ8NB78 822 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 OR4C6Q8NH72 309 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 PLD4Q96BZ4 506 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 OMDQ99983 421 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 SEMA3CQ99985 751 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 USP29Q9HBJ7 922 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 TJP2Q9UDY2 1190 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 GGA2Q9UJY4 613 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 STOML2Q9UJZ1 356 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 MYLKQ15746 1914 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 TARSL2A2RTX5 802 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 CSO75390 466 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 HMBSP08397 361 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 PABPC1P11940 636 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 GOT1P17174 413 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 POLR2EP19388 210 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 MLLT3P42568 568 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 NDST1P52848 882 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 DAB2P98082 770 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 EFEMP1Q12805 493 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 TRIP4Q15650 581 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 CST6Q15828 149 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 MPP7Q5T2T1 576 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 NAPEPLDQ6IQ20 393 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 SND1Q7KZF4 910 aaKnown RBP eCLIP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 ZNF557Q8N988 423 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 TTC17Q96AE7 1141 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 UBXN6Q9BZV1 441 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 SDCBP2Q9H190 292 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 KDM4CQ9H3R0 1056 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 ABCB8Q9NUT2 735 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 MARCH2Q9P0N8 246 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 PCDHGA8Q9Y5G5 932 aa12.13□□□□□ -0.47
AMBRA1-207ENST00000529553 H3BQV1 296 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 LATS1O95835 1130 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 ITGB2P05107 769 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 HOXD13P35453 343 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 DUSP3P51452 185 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 UBAP2LQ14157 1087 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 PRPF39Q86UA1 669 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 XXYLT1Q8NBI6 393 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 TAF4BQ92750 862 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 CYFIP2Q96F07 1278 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 GZF1Q9H116 711 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 ABCG4Q9H172 646 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 AGPAT3Q9NRZ7 376 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 DACH1Q9UI36 760 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
AMBRA1-207ENST00000529553 A0A1W2PP55 124 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 SLC12A8A0AV02 714 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 MID1O15344 667 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 TGFB1I1O43294 461 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 ASLP04424 464 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 RPN1P04843 607 aaKnown RBP12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 KRT10P13645 584 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 DGKAP23743 735 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 ADORA2BP29275 332 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 SLC8A1P32418 973 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 TXLNAP40222 546 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 CLDN10P78369 228 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 NCOA4Q13772 614 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 STAT4Q14765 748 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 ISXQ2M1V0 245 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
AMBRA1-207ENST00000529553 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms