RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DUSP15Q9H1R2 295 aaPredicted RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PARD6AQ9NPB6 346 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SIX2Q9NPC8 291 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 VPS45Q9NRW7 570 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ELOVL2Q9NXB9 296 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PCDHGC3Q9UN70 934 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CNTN6Q9UQ52 1028 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PCDHGA5Q9Y5G8 931 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 EML5Q05BV3 1969 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 M0QYT0 321 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 GFRA2O00451 464 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 NPC1O15118 1278 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 TIMM44O43615 452 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 DAB1O75553 588 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 ERBB2P04626 1255 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 CISD3P0C7P0 127 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 HLA-EP13747 358 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 HNRNPLP14866 589 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 DESP17661 470 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 GABRG2P18507 467 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 NDUFV2P19404 249 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 TACR2P21452 398 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 CCR1P32246 355 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 NNMTP40261 264 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 IL12RB1P42701 662 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 KLK7P49862 253 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SGSHP51688 502 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SLC6A3Q01959 620 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 DEUP1Q05D60 604 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 RING1Q06587 406 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 UAP1L1Q3KQV9 507 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SYPL2Q5VXT5 272 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 NAA35Q5VZE5 725 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 PMS2CLQ68D20 193 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 MBLAC2Q68D91 279 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 KIAA1211LQ6NV74 962 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 TMEM110Q86TL2 294 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 FAM124AQ86V42 546 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF366Q8N895 744 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 C18orf8Q96DM3 657 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SIPA1Q96FS4 1042 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 BTN2A3PQ96KV6 586 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 FCRL2Q96LA5 508 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 RPRD1AQ96P16 312 aaPredicted RBP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 EDEM2Q9BV94 578 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 NUSAP1Q9BXS6 441 aaKnown RBP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 STK33Q9BYT3 514 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SIK2Q9H0K1 926 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 MIR1-1HGQ9H1L0 117 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SLC6A17Q9H1V8 727 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 PRDM16Q9HAZ2 1276 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 CYTH4Q9UIA0 394 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 CLEC4EQ9ULY5 219 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 SLC27A6Q9Y2P4 619 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
CMTM1-210ENST00000528441 RIF1Q5UIP0 2472 aaKnown RBP9.41□□□□□ -0.9
CMTM1-210ENST00000528441 MYO15AQ9UKN7 3530 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 A0A0A0MRY4 1105 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 DCDC2BA2VCK2 349 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 F8VZ95 297 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 BNIP3LO60238 219 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 RNASEH1O60930 286 aaKnown RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 LUC7L3O95232 432 aaKnown RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 SERPINC1P01008 464 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 DNTTP04053 509 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 GLI1P08151 1106 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 MMEP08473 750 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 CCDC172P0C7W6 258 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF18P17022 549 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 HLA-FP30511 346 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 SLC6A4P31645 630 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 CD70P32970 193 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 CLCN1P35523 988 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 GGCXP38435 758 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 P2RY2P41231 377 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 DPP6P42658 865 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 MAPK8P45983 427 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 RPS24P62847 133 aaKnown RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 KCNMA1Q12791 1236 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 NNTQ13423 1086 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 TAF5Q15542 800 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 CDO1Q16878 200 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 FUT11Q495W5 492 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 PTPN20Q4JDL3 420 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 MS4A13Q5J8X5 152 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 SYCP2LQ5T4T6 812 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 PIK3R6Q5UE93 754 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 TCEAL6Q6IPX3 200 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 PHLDB2Q86SQ0 1253 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 TMPRSS6Q8IU80 811 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 ZDHHC17Q8IUH5 632 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 FAM71AQ8IYT1 594 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 FRMD1Q8N878 549 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms