RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ERVH48-1M5A8F1 160 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 PAPSS1O43252 624 aaPredicted RBP11□□□□□ -0.65
CPSF1-203ENST00000527916 TBX18O95935 607 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 RALAP11233 206 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 RARGP13631 454 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
CPSF1-203ENST00000527916 BMP6P22004 513 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 IL12RB1P42701 662 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 FMO5P49326 533 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 SLC8A3P57103 927 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 CUL2Q13617 745 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 ENPP2Q13822 863 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 MORC3Q14149 939 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 RTP5Q14D33 572 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 PM20D1Q6GTS8 502 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 ISM2Q6H9L7 571 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 SCD5Q86SK9 330 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 ARHGAP18Q8N392 663 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 ARID3AQ99856 593 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 TM9SF3Q9HD45 589 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 FBXO10Q9UK96 956 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 ZBTB32Q9Y2Y4 487 aaPredicted RBP11□□□□□ -0.65
CPSF1-203ENST00000527916 TMEM131Q92545 1883 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 PTPN13Q12923 2485 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 MUC22E2RYF6 1773 aaPredicted RBP10.99□□□□□ -0.65
CPSF1-203ENST00000527916 A0A1W2PQH9 124 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 H0Y8X5 98 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 ENC1O14682 589 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 CYP26A1O43174 497 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 RFPL3O75679 317 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 LDOC1O95751 146 aaPredicted RBP10.99□□□□□ -0.65
CPSF1-203ENST00000527916 GNA14O95837 355 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 EPHX1P07099 455 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 VDRP11473 427 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 ACTN2P35609 894 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 MARSP56192 900 aaKnown RBP10.99□□□□□ -0.65
CPSF1-203ENST00000527916 C21orf59P57076 290 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 CXADRP78310 365 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 COG7P83436 770 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 KCNC4Q03721 635 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 ARID5AQ03989 594 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 CETN1Q12798 172 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 TARDBPQ13148 414 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPSF1-203ENST00000527916 EIF4HQ15056 248 aaKnown RBP10.99□□□□□ -0.65
CPSF1-203ENST00000527916 SERPINA13PQ6UXR4 307 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 ANKS1BQ7Z6G8 1248 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 PIGZQ86VD9 579 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 CACUL1Q86Y37 369 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 UBR7Q8N806 425 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 SKA1Q96BD8 255 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 WBP1Q96G27 269 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 C6orf106Q9H6K1 298 aaPredicted RBP10.99□□□□□ -0.65
CPSF1-203ENST00000527916 PLK2Q9NYY3 685 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 ZNF510Q9Y2H8 683 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 CKAP5Q14008 2032 aa10.99□□□□□ -0.65
CPSF1-203ENST00000527916 CYSRT1A8MQ03 144 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 KCNK3O14649 394 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 XPO1O14980 1071 aaKnown RBP10.98□□□□□ -0.65
CPSF1-203ENST00000527916 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 TIMM44O43615 452 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-203ENST00000527916 SEMA4FO95754 770 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 PAEPP09466 180 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 ABCB4P21439 1286 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 CD27P26842 260 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 CHKAP35790 457 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 CTSKP43235 329 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 COPAP53621 1224 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 BCAT1P54687 386 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 MFAP3P55082 362 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 IL9RQ01113 521 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 RHDQ02161 417 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 TLE3Q04726 772 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 ZNF234Q14588 700 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 GEN1Q17RS7 908 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 CCDC40Q4G0X9 1142 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 SGO2Q562F6 1265 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 C10orf120Q5SQS8 335 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 Q6ZNB5 142 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 SCML4Q8N228 414 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 OR2T3Q8NH03 318 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 LMO3Q8TAP4 145 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 NELFBQ8WX92 580 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 KCTD13Q8WZ19 329 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 JAKMIP2Q96AA8 810 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 CNDP2Q96KP4 475 aaKnown RBP10.98□□□□□ -0.65
CPSF1-203ENST00000527916 NT5C1BQ96P26 610 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 ACE2Q9BYF1 805 aaPredicted RBP10.98□□□□□ -0.65
CPSF1-203ENST00000527916 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 CIPCQ9C0C6 399 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 BTBD1Q9H0C5 482 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 LHX5Q9H2C1 402 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 ELOVL2Q9NXB9 296 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 HESX1Q9UBX0 185 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 NAGPAQ9UK23 515 aa10.98□□□□□ -0.65
CPSF1-203ENST00000527916 A0A1B0GTQ1 180 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 STC2O76061 302 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 FSBPO95073 299 aa10.97□□□□□ -0.65
CPSF1-203ENST00000527916 FGFR1OPO95684 399 aaKnown RBP10.97□□□□□ -0.65
CPSF1-203ENST00000527916 ZBED1O96006 694 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms