RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 USP41Q3LFD5 358 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 UNC5AQ6ZN44 842 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 SLC15A4Q8N697 577 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 PCDH20Q8N6Y1 951 aaKnown RBP12.81□□□□□ -0.36
TSKU-203ENST00000527881 ZNF781Q8N8C0 355 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 SREK1Q8WXA9 508 aaKnown RBP12.81□□□□□ -0.36
TSKU-203ENST00000527881 ITPKCQ96DU7 683 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 STRA6Q9BX79 667 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
TSKU-203ENST00000527881 TPK1Q9H3S4 243 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 OLAHQ9NV23 265 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 GPRC5DQ9NZD1 345 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 IGKV6D-41A0A0C4DH26 115 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 TPST1O60507 370 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 CAPN15O75808 1086 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 CD19P15391 556 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 CUL2Q13617 745 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 ZNF618Q5T7W0 954 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 UTS2BQ765I0 119 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 TBC1D15Q8TC07 691 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 ZNF606Q8WXB4 792 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 NSMCE3Q96MG7 304 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 EFHD1Q9BUP0 239 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 IMPG2Q9BZV3 1241 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
TSKU-203ENST00000527881 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
TSKU-203ENST00000527881 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
TSKU-203ENST00000527881 KPNA4O00629 521 aaPredicted RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 CYP2C9P11712 490 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 KDELR1P24390 212 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 ACOT2P49753 483 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 NEK2P51955 445 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TSPY1Q01534 308 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 PPM1JQ5JR12 505 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 UNC5BQ8IZJ1 945 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TMEM35BQ8NCS4 154 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 CXorf38Q8TB03 319 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 DCAF4Q8WV16 495 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 NPAS2Q99743 824 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 SLC29A1Q99808 456 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 NAA50Q9GZZ1 169 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 PCDHAC1Q9H158 963 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 ATP11BQ9Y2G3 1177 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 H3BMQ9 156 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 PLIN3O60664 434 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 GDF11O95390 407 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 BCL10O95999 233 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TKTP29401 623 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 SOX10P56693 466 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TUBA4AP68366 448 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 GTF2BQ00403 316 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 GPD1LQ8N335 351 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TDRD5Q8NAT2 981 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 HM13Q8TCT9 377 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 COG8Q96MW5 612 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 MTG1Q9BT17 334 aaPredicted RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 SLC2A11Q9BYW1 496 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 PIH1D1Q9NWS0 290 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 MYH9P35579 1960 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 A8MU76 341 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 PABPC1P11940 636 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 KRT3P12035 628 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 ZNF26P17031 533 aaPredicted RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 NR4A1P22736 598 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 MMP8P22894 467 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 RARRES1P49788 294 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 TAF5Q15542 800 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TICAM1Q8IUC6 712 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 TMEM126BQ8IUX1 230 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 RAVER1Q8IY67 606 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 RPF2Q9H7B2 306 aaKnown RBP12.8□□□□□ -0.36
TSKU-203ENST00000527881 EHMT1Q9H9B1 1298 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 EFCAB1Q9HAE3 211 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 POPDC2Q9HBU9 364 aa12.8□□□□□ -0.36
TSKU-203ENST00000527881 DYTNA2CJ06 578 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 KRBA1A5PL33 1030 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 TRDMT1O14717 391 aaKnown RBP12.79□□□□□ -0.36
TSKU-203ENST00000527881 CACNB3P54284 484 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 CDH6P55285 790 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 CRADDP78560 199 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 GABPAQ06546 454 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 PCLAFQ15004 111 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 DEPDC1Q5TB30 811 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 GABPB2Q8TAK5 448 aaPredicted RBP12.79□□□□□ -0.36
TSKU-203ENST00000527881 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 AGAP3Q96P47 875 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 TSPAN18Q96SJ8 248 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 ZNF358Q9NW07 568 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 GNPTGQ9UJJ9 305 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 AURKCQ9UQB9 309 aa12.79□□□□□ -0.36
TSKU-203ENST00000527881 PRSS51A0A1B0GVH4 220 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms