RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 GOLGA6L22H0YM25 854 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 ATP5BP06576 529 aaKnown RBP19.99■□□□□ 0.79
CAPN1-211ENST00000527739 CD70P32970 193 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 CLCN1P35523 988 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 SNX16P57768 344 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 BPIFB4P59827 614 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 RPS24P62847 133 aaKnown RBP19.99■□□□□ 0.79
CAPN1-211ENST00000527739 NNTQ13423 1086 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 DRAP1Q14919 205 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-211ENST00000527739 UAP1L1Q3KQV9 507 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 TCP11X2Q5H9J9 407 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 CT47A1Q5JQC4 288 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-211ENST00000527739 EFHC1Q5JVL4 640 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 MPP7Q5T2T1 576 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 BEND5Q7L4P6 421 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 ADIPOR2Q86V24 386 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 LGI2Q8N0V4 545 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 DEFB106AQ8N104 65 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 WFDC5Q8TCV5 224 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 SLC39A13Q96H72 371 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 HSPA12BQ96MM6 686 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 TMEM9BQ9NQ34 198 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 XPO7Q9UIA9 1087 aaKnown RBP19.99■□□□□ 0.79
CAPN1-211ENST00000527739 PCDHGC3Q9UN70 934 aa19.99■□□□□ 0.79
CAPN1-211ENST00000527739 CD6P30203 668 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 DPP6P42658 865 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 MAPK8P45983 427 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 PITX1P78337 314 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-211ENST00000527739 KCNMA1Q12791 1236 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 CDH18Q13634 790 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 ENPP2Q13822 863 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 MS4A13Q5J8X5 152 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 KLHDC7AQ5VTJ3 777 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 DAB2IPQ5VWQ8 1189 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 RAP1GAP2Q684P5 730 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 C11orf57Q6ZUT1 292 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-211ENST00000527739 CHSY1Q86X52 802 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 ATP6V0D2Q8N8Y2 350 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 ZNF557Q8N988 423 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-211ENST00000527739 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 MYEOVQ96EZ4 313 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 PRICKLE1Q96MT3 831 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-211ENST00000527739 IRX2Q9BZI1 471 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-211ENST00000527739 LHX5Q9H2C1 402 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 DDIT4Q9NX09 232 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 PILRBQ9UKJ0 227 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 FHOD1Q9Y613 1164 aa19.98■□□□□ 0.79
CAPN1-211ENST00000527739 CFAP47Q6ZTR5 3102 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 H0Y626 953 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 GIPC1O14908 333 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 TPM2P07951 284 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 DLDP09622 509 aaKnown RBP19.97■□□□□ 0.79
CAPN1-211ENST00000527739 ABCB4P21439 1286 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 TACR2P21452 398 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 EEF1GP26641 437 aaKnown RBP19.97■□□□□ 0.79
CAPN1-211ENST00000527739 LMAN2Q12907 356 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 TAF3Q5VWG9 929 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 SASS6Q6UVJ0 657 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 FAM183BPQ6ZVS7 135 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 FAM124AQ86V42 546 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 SLC41A1Q8IVJ1 513 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 FAM71AQ8IYT1 594 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.97■□□□□ 0.79
CAPN1-211ENST00000527739 FIBINQ8TAL6 211 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 TOE1Q96GM8 510 aaKnown RBP19.97■□□□□ 0.79
CAPN1-211ENST00000527739 BTN2A3PQ96KV6 586 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 VPS16Q9H269 839 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 ITM2CQ9NQX7 267 aa19.97■□□□□ 0.79
CAPN1-211ENST00000527739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.97■□□□□ 0.79
CAPN1-211ENST00000527739 EVLQ9UI08 416 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-211ENST00000527739 THADAQ6YHU6 1953 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 HSF2BPO75031 334 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 ERBB2P04626 1255 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 GLI1P08151 1106 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 ATXN3P54252 364 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-211ENST00000527739 RNASE9P60153 205 aaKnown RBP19.96■□□□□ 0.79
CAPN1-211ENST00000527739 ST8SIA6P61647 398 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 NME3Q13232 169 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 DUOXA1Q1HG43 343 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 SYCP2LQ5T4T6 812 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 PSAPL1Q6NUJ1 521 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 OR2T3Q8NH03 318 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 CEP76Q8TAP6 659 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 ENOX1Q8TC92 643 aaKnown RBP19.96■□□□□ 0.79
CAPN1-211ENST00000527739 FOXJ1Q92949 421 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 GTPBP2Q9BX10 602 aaKnown RBP19.96■□□□□ 0.79
CAPN1-211ENST00000527739 GPR174Q9BXC1 333 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 FSCN3Q9NQT6 498 aa19.96■□□□□ 0.79
CAPN1-211ENST00000527739 FRYQ5TBA9 3013 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 MEI4A8MW99 385 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 F5H5T6 163 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 SLC2A3P11169 496 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 MAOBP27338 520 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 OXTRP30559 389 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 TPMTP51580 245 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 COPAP53621 1224 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 SHC2P98077 582 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 SLC6A3Q01959 620 aa19.95■□□□□ 0.78
CAPN1-211ENST00000527739 GFPT1Q06210 699 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-211ENST00000527739 PTPN20Q4JDL3 420 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms