RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 TTC39BQ5VTQ0 682 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 RNF43Q68DV7 783 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 FAM72DQ6L9T8 149 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 FBXL22Q6P050 247 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 RFWD3Q6PCD5 774 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 C14orf80Q86SX3 495 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 FAM72BQ86X60 149 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 PYROXD2Q8N2H3 581 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 DNASE1L2Q92874 299 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 TMA16Q96EY4 203 aaKnown RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 PRICKLE1Q96MT3 831 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 EBF3Q9H4W6 596 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 DHX35Q9H5Z1 703 aaKnown RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 ECT2Q9H8V3 914 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 SLC2A4RGQ9NR83 387 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 GPATCH2LQ9NWQ4 482 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 DDX56Q9NY93 547 aaKnown RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 PPARGC1AQ9UBK2 798 aaKnown RBP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 SORCS3Q9UPU3 1222 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN1-205ENST00000526954 PCDHA3Q9Y5H8 950 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 SNX10Q9Y5X0 201 aa17.07■□□□□ 0.32
CAPN1-205ENST00000526954 CCDC66A2RUB6 948 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 MIF4GDA9UHW6 222 aaKnown RBP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 TRDMT1O14717 391 aaKnown RBP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 HOXC11O43248 304 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 LRIG2O94898 1065 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 FTCDO95954 541 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 ADH1CP00326 375 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 PENKP01210 267 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 CYP17A1P05093 508 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 SRFP11831 508 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 HOXC13P31276 330 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 HCAR3P49019 387 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 TNK2Q07912 1038 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 NR1H3Q13133 447 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 PDK2Q15119 407 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 ATP13A4Q4VNC1 1196 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 LY6G5CQ5SRR4 150 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 FYB2Q5VWT5 728 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 TMEM25Q86YD3 366 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 RNF135Q8IUD6 432 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 KATNAL2Q8IYT4 538 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 GJD3Q8N144 294 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 HJURPQ8NCD3 748 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 HSPH1Q92598 858 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 IGSF8Q969P0 613 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 MYEOVQ96EZ4 313 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 HES6Q96HZ4 224 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 KCTD15Q96SI1 283 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 EPAS1Q99814 870 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 RETREG1Q9H6L5 497 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.06■□□□□ 0.32
CAPN1-205ENST00000526954 VANGL2Q9ULK5 521 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 DUSP12Q9UNI6 340 aa17.06■□□□□ 0.32
CAPN1-205ENST00000526954 COL4A3Q01955 1670 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 OTOL1A6NHN0 477 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-205ENST00000526954 KIF5CO60282 957 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 TSPAN3O60637 253 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 CYBBP04839 570 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 GGCXP38435 758 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 PEX5P50542 639 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
CAPN1-205ENST00000526954 PFKPQ01813 784 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 GAD2Q05329 585 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 RABGAP1LQ5R372 815 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 MEI1Q5TIA1 1274 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 TPGS1Q6ZTW0 290 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 VSIG1Q86XK7 387 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 CSGALNACT1Q8TDX6 532 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 TSC1Q92574 1164 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 KRT35Q92764 455 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 P2RY11Q96G91 374 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 RPRD1AQ96P16 312 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-205ENST00000526954 PCDH18Q9HCL0 1135 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 RCOR3Q9P2K3 495 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-205ENST00000526954 NEU3Q9UQ49 428 aa17.05■□□□□ 0.32
CAPN1-205ENST00000526954 TYW5A2RUC4 315 aaKnown RBP17.04■□□□□ 0.32
CAPN1-205ENST00000526954 ZNF487B1APH4 448 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 NARSO43776 548 aaKnown RBP17.04■□□□□ 0.32
CAPN1-205ENST00000526954 SRGAP2O75044 1071 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 ADH5P11766 374 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 TNNT1P13805 278 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 KDELR1P24390 212 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 MSNP26038 577 aaKnown RBP17.04■□□□□ 0.32
CAPN1-205ENST00000526954 GJC1P36383 396 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 SGSHP51688 502 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 CDH6P55285 790 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 RPS24P62847 133 aaKnown RBP17.04■□□□□ 0.32
CAPN1-205ENST00000526954 GAB4Q2WGN9 574 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 CHST9Q7L1S5 443 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 MAP7D3Q8IWC1 876 aa17.04■□□□□ 0.32
CAPN1-205ENST00000526954 C17orf53Q8N3J3 647 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-205ENST00000526954 KCTD6Q8NC69 237 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms