RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TULP2O00295 520 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 XPO1O14980 1071 aaKnown RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 ATP8B1O43520 1251 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 STX10O60499 249 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 CBFA2T3O75081 653 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 SEMA4FO95754 770 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF883P0CG24 379 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 HLA-FP30511 346 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 AFF3P51826 1226 aaKnown RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 BNC1Q01954 994 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 PDE4CQ08493 712 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 TEAD4Q15561 434 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 ZCWPW2Q504Y3 356 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 MPPE1Q53F39 396 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 CCDC157Q569K6 752 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 C19orf48Q6RUI8 117 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 SARM1Q6SZW1 724 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 CHST9Q7L1S5 443 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 AHI1Q8N157 1196 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 ANKRD52Q8NB46 1076 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 MDM1Q8TC05 714 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 NDRG1Q92597 394 aaKnown RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 EDEM1Q92611 657 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 PCED1AQ9H1Q7 454 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 C6orf106Q9H6K1 298 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 ABCB8Q9NUT2 735 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 SFMBT1Q9UHJ3 866 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 GGA2Q9UJY4 613 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 HBS1LQ9Y450 684 aaKnown RBP12.23□□□□□ -0.45
CAPN1-204ENST00000526468 SLCO1B1Q9Y6L6 691 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 SMG1Q96Q15 3661 aaKnown RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 PABPC1P11940 636 aaKnown RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 ACSL1P33121 698 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 CSNK1EP49674 416 aaKnown RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 CCT8P50990 548 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 CAMK2GQ13555 558 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 CUL2Q13617 745 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 TRIP4Q15650 581 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 EDRF1Q3B7T1 1238 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF771Q7L3S4 317 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 BHLHA9Q7RTU4 235 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 ADAT2Q7Z6V5 191 aaKnown RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 GLRX5Q86SX6 157 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 SLCO6A1Q86UG4 719 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 BAHD1Q8TBE0 780 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 NUP62CLQ9H1M0 184 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 FBRSQ9HAH7 460 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 RAB20Q9NX57 234 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAPN1-204ENST00000526468 BTBD3Q9Y2F9 522 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 GPSM3Q9Y4H4 160 aa12.22□□□□□ -0.45
CAPN1-204ENST00000526468 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.45
CAPN1-204ENST00000526468 CETN3O15182 167 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 FSBPO95073 299 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 DNTTP04053 509 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 ATXN1LP0C7T5 689 aaKnown RBP12.21□□□□□ -0.45
CAPN1-204ENST00000526468 SETSIPP0DME0 302 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 GRIA4P48058 902 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 SGSHP51688 502 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 YWHAEP62258 255 aaKnown RBP12.21□□□□□ -0.45
CAPN1-204ENST00000526468 IL9RQ01113 521 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 KIF19Q2TAC6 998 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 COL28A1Q2UY09 1125 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 TEX35Q5T0J7 233 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF776Q68DI1 518 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-204ENST00000526468 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.45
CAPN1-204ENST00000526468 PDZD3Q86UT5 571 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 RHBDD1Q8TEB9 315 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 FAXDC2Q96IV6 333 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 TIGD1Q96MW7 591 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 CDC6Q99741 560 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 UBXN6Q9BZV1 441 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 BTBD1Q9H0C5 482 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 GOLPH3LQ9H4A5 285 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 PLA2G4CQ9UP65 541 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 RAXQ9Y2V3 346 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 PCDHGB2Q9Y5G2 931 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 SNX11Q9Y5W9 270 aa12.21□□□□□ -0.45
CAPN1-204ENST00000526468 V9GYY5 206 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-204ENST00000526468 TYW5A2RUC4 315 aaKnown RBP12.2□□□□□ -0.46
CAPN1-204ENST00000526468 YJEFN3A6XGL0 299 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 E7ENQ6 273 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 M0QYV0 167 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 SLC16A3O15427 465 aaKnown RBP12.2□□□□□ -0.46
CAPN1-204ENST00000526468 TIMM44O43615 452 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 TBL1XO60907 577 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 LATS1O95835 1130 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 LCP1P13796 627 aa12.2□□□□□ -0.46
CAPN1-204ENST00000526468 RGS7P49802 495 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms