RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TERB1Q8NA31 727 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 SPATA5Q8NB90 893 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 FAM71BQ8TC56 605 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 REPS1Q96D71 796 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 MMS19Q96T76 1030 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 NUDT22Q9BRQ3 303 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 C1QTNF7Q9BXJ2 289 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 FLRT1Q9NZU1 646 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 PCDHB2Q9Y5E7 798 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 NRXN1Q9ULB1 1477 aa4.42□□□□□ -1.7
CD44-219ENST00000525685 PIK3C2GO75747 1445 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 UBE2Q2LH0YL09 131 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 ZNF213O14771 459 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 NTSR2O95665 410 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 ANXA6P08133 673 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 TMIGD3P0DMS9 266 aaPredicted RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 PDIA3P30101 505 aaKnown RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 PPM1FP49593 454 aaPredicted RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 DIO1P49895 249 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 PSG6Q00889 435 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 DEUP1Q05D60 604 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 LMAN2Q12907 356 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 SLC10A2Q12908 348 aaPredicted RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 PTK2BQ14289 1009 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 KRT72Q14CN4 511 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 TIGD6Q17RP2 521 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 CERKLQ49MI3 558 aaPredicted RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 TMEM119Q4V9L6 283 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 TMEM63BQ5T3F8 832 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 CCDC144NLQ6NUI1 221 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 ZNF782Q6ZMW2 699 aaPredicted RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 GLCCI1Q86VQ1 547 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 PNPLA1Q8N8W4 532 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 ANKRD42Q8N9B4 389 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 WDYHV1Q96HA8 205 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 MACROD1Q9BQ69 325 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 ADGRE3Q9BY15 652 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 RNF7Q9UBF6 113 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 HERC5Q9UII4 1024 aaKnown RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 ASAP1Q9ULH1 1129 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 MORC2Q9Y6X9 1032 aaPredicted RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 LAMC1P11047 1609 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 NKTRP30414 1462 aaKnown RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 IQSEC2Q5JU85 1478 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 CHD2O14647 1828 aaKnown RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 XIRP1Q702N8 1843 aaKnown RBP4.41□□□□□ -1.7
CD44-219ENST00000525685 LRRC7Q96NW7 1537 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 KNDC1Q76NI1 1749 aa4.41□□□□□ -1.7
CD44-219ENST00000525685 PTPRUQ92729 1446 aa4.4□□□□□ -1.7
CD44-219ENST00000525685 ALKQ9UM73 1620 aa4.4□□□□□ -1.7
CD44-219ENST00000525685 HMX3A6NHT5 357 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 TTC34A8MYJ7 566 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 TJP3O95049 919 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 LATS1O95835 1130 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 MCM5P33992 734 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 HTR7P34969 479 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 RNASELQ05823 741 aaKnown RBP4.4□□□□□ -1.71
CD44-219ENST00000525685 PRKG1Q13976 671 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 GRM4Q14833 912 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 ANKRD45Q5TZF3 282 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 ANKRD40Q6AI12 368 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 EXOC8Q8IYI6 725 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 C12orf76Q8N812 135 aaPredicted RBP4.4□□□□□ -1.71
CD44-219ENST00000525685 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.71
CD44-219ENST00000525685 OVCA2Q8WZ82 227 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 SCLT1Q96NL6 688 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 FYTTD1Q96QD9 318 aaKnown RBP4.4□□□□□ -1.71
CD44-219ENST00000525685 HERPUD2Q9BSE4 406 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 FAM167BQ9BTA0 163 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 SLC29A3Q9BZD2 475 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 CCDC134Q9H6E4 229 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 TMEM8AQ9HCN3 771 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 ZNF70Q9UC06 446 aaPredicted RBP4.4□□□□□ -1.71
CD44-219ENST00000525685 SCAF8Q9UPN6 1271 aaKnown RBP4.4□□□□□ -1.71
CD44-219ENST00000525685 RPGRIP1LQ68CZ1 1315 aa4.4□□□□□ -1.71
CD44-219ENST00000525685 PRAG1Q86YV5 1406 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 SYT5O00445 386 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 ACKR2O00590 384 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 ACTL6BO94805 426 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 CER1O95813 267 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 MT-CO3P00414 261 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 ALADP13716 330 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 GYS1P13807 737 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 KLRK1P26718 216 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 SERPINF1P36955 418 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 IGHMBP2P38935 993 aaKnown RBP4.39□□□□□ -1.71
CD44-219ENST00000525685 HALP42357 657 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 RENBPP51606 427 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 JAK3P52333 1124 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 SSBP2P81877 361 aaPredicted RBP4.39□□□□□ -1.71
CD44-219ENST00000525685 MTAPQ13126 283 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 PROSER3Q2NL68 480 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 TRIM71Q2Q1W2 868 aaKnown RBP4.39□□□□□ -1.71
CD44-219ENST00000525685 AASDHQ4L235 1098 aaPredicted RBP4.39□□□□□ -1.71
CD44-219ENST00000525685 C4orf46Q504U0 113 aa4.39□□□□□ -1.71
CD44-219ENST00000525685 RNASE12Q5GAN4 147 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms