RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NOP9Q86U38 636 aaKnown RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 MARCH9Q86YJ5 346 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 LURAP1LQ8IV03 231 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 BLIDQ8IZY5 108 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 RCBTB1Q8NDN9 531 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 PIGOQ8TEQ8 1089 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 PSMG2Q969U7 264 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 LIN37Q96GY3 246 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 CNOT6LQ96LI5 555 aaKnown RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 FAM20AQ96MK3 541 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 CCDC43Q96MW1 224 aaKnown RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 CDC6Q99741 560 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 P2RY13Q9BPV8 354 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 EIF2AK1Q9BQI3 630 aaKnown RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 ADPGKQ9BRR6 497 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 NUSAP1Q9BXS6 441 aaKnown RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 TUBGCP4Q9UGJ1 667 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 TBX20Q9UMR3 447 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 NUB1Q9Y5A7 615 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 TIMM13Q9Y5L4 95 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 URB1O60287 2271 aaKnown RBP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 SPTA1P02549 2419 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 PTPRQQ9UMZ3 2332 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 COL5A1P20908 1838 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 PIEZO2Q9H5I5 2752 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 CCDC196A0A1B0GTZ2 297 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 A0A1W2PQ27 194 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 A0A1W2PQ64 194 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 A0A1W2PQC6 194 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 A0A1W2PQD8 194 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 MTMR11A4FU01 709 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 LYPLA2O95372 231 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 LCP1P13796 627 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 DRD1P21728 446 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 NMT1P30419 496 aaKnown RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 GJA4P35212 333 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 P2RY2P41231 377 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 EPHB3P54753 998 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 AKAP17AQ02040 695 aaKnown RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 PLD1Q13393 1074 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 MAPK6Q16659 721 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 ARHGAP15Q53QZ3 475 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 XKR4Q5GH76 650 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 NT5DC1Q5TFE4 455 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 LYSMD4Q5XG99 296 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 ALKAL1Q6UXT8 129 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 LPCAT2Q7L5N7 544 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 DNAJB7Q7Z6W7 309 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 TMEM150AQ86TG1 271 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 C11orf74Q86VG3 221 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 SYT12Q8IV01 421 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 SFTPA1Q8IWL2 248 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 ZBTB8OSQ8IWT0 167 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 ZNF843Q8N446 348 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 HDDC3Q8N4P3 179 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 MINDY1Q8N5J2 469 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 ATAD1Q8NBU5 361 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 STKLD1Q8NE28 680 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 OLIG1Q8TAK6 271 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 ADAMTS14Q8WXS8 1223 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 USP13Q92995 863 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 INTS4Q96HW7 963 aaKnown RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 SLC46A2Q9BY10 475 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 SLC6A17Q9H1V8 727 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 CDT1Q9H211 546 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 TASP1Q9H6P5 420 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 SH3GLB2Q9NR46 395 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 GPR27Q9NS67 375 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 THG1LQ9NWX6 298 aaKnown RBP6.85□□□□□ -1.31
VPS13B-211ENST00000522802 PILRBQ9UKJ0 227 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 MAFFQ9ULX9 164 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 RAI2Q9Y5P3 530 aa6.85□□□□□ -1.31
VPS13B-211ENST00000522802 A0A087WV48 116 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 BLACEA4D250 179 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 PYCARD-AS1I3L0S3 204 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ACKR2O00590 384 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 SH3BP5O60239 455 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 CCNT1O60563 726 aaKnown RBP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 OPHN1O60890 802 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 LARGE1O95461 756 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 IFNAR1P17181 557 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ARL4AP40617 200 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ALDH1A3P47895 512 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ERVFRD-1P60508 538 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 SUMO1P63165 101 aaKnown RBP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 YWHAHQ04917 246 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 SQSTM1Q13501 440 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 PTPAQ15257 358 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 TRIP6Q15654 476 aaKnown RBP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 FBXO43Q4G163 708 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 EARS2Q5JPH6 523 aaKnown RBP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ATF7IP2Q5U623 682 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 PPP4R3AQ6IN85 833 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 CENPPQ6IPU0 288 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 Q6ZUG5 572 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 USP53Q70EK8 1073 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 NEK8Q86SG6 692 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 IRF2BP1Q8IU81 584 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms