RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 DAOAP59103 153 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 IRX4P78413 519 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 TMPRSS15P98073 1019 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NIPAL4Q0D2K0 466 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PAFAH1B3Q15102 231 aaKnown RBP11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PDK1Q15118 436 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 TEX44Q53QW1 395 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 FAM35AQ86V20 835 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SYT15Q9BQS2 421 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PAAF1Q9BRP4 392 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 C20orf27Q9GZN8 174 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 EBF2Q9HAK2 575 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SAR1AQ9NR31 198 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SIRPGQ9P1W8 387 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CDY2AQ9Y6F7 541 aa11.07□□□□□ -0.64
RAB11FIP1-204ENST00000522774 USP17L7P0C7H9 530 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CCND1P24385 295 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PTPN4P29074 926 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ADRA1BP35368 520 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SERPINB9P50453 376 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 IRF5Q13568 498 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CRYMQ14894 314 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 MARK2Q7KZI7 788 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ALYREFQ86V81 257 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 HACE1Q8IYU2 909 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 STKLD1Q8NE28 680 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 E2F7Q96AV8 911 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PGBD4Q96DM1 585 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PTCD3Q96EY7 689 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 GORASP1Q9BQQ3 440 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 KATNAL1Q9BW62 490 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 EIF2B3Q9NR50 452 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 MTO1Q9Y2Z2 717 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SNX10Q9Y5X0 201 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CAPN9O14815 690 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 STK10O94804 968 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ERCC2P18074 760 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CRHR1P34998 444 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 MRPS6P82932 125 aaKnown RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 OCRLQ01968 901 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 GPR162Q16538 588 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 C16orf46Q6P387 395 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ZCCHC23Q6ZST2 131 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CCDC91Q7Z6B0 441 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NUDCD3Q8IVD9 361 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 APBB2Q92870 758 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 FAM105AQ9NUU6 356 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NKX1-2Q9UD57 310 aaPredicted RBP11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 LNPEPQ9UIQ6 1025 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 BRCA2P51587 3418 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SF3B1O75533 1304 aaKnown RBP eCLIP11.06□□□□□ -0.645e-20■■■■■ 89.6
RAB11FIP1-204ENST00000522774 TRPM7Q96QT4 1865 aa11.06□□□□□ -0.64
RAB11FIP1-204ENST00000522774 I3L4J1 428 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PPP1R12AO14974 1030 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 DNAJC6O75061 913 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 USP12O75317 370 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 BPGMP07738 259 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 GMPRP36959 345 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ZBTB16Q05516 673 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SEMA3BQ13214 749 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 TAF1CQ15572 869 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PACS1Q6VY07 963 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 TIFABQ6ZNK6 161 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CYS1Q717R9 158 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PID1Q7Z2X4 250 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NPWQ8N729 165 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 AGAP3Q96P47 875 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 XPNPEP3Q9NQH7 507 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ARMCX1Q9P291 453 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 MARCOQ9UEW3 520 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NUP205Q92621 2012 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CASTOR2A6NHX0 329 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 TPP1O14773 563 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 GSRP00390 522 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 F7P08709 466 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 KITP10721 976 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 GNAT1P11488 350 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NCAM1P13591 858 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PGAM1P18669 254 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 RASSF2P50749 326 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 SCNN1GP51170 649 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 CST9Q5W186 159 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 BHLHA9Q7RTU4 235 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 EDEM1Q92611 657 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 C7orf26Q96N11 449 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 NMUR2Q9GZQ4 415 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 DDIT4Q9NX09 232 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 EMCNQ9ULC0 261 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 HHLA1C9JL84 531 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 FCHO1O14526 889 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 WFS1O76024 890 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 THP07101 528 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 PTPN3P26045 913 aa11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 IFRD2Q12894 506 aaPredicted RBP11.05□□□□□ -0.64
RAB11FIP1-204ENST00000522774 RAB41Q5JT25 222 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms