RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SEPT3Q9UH03 358 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 AGO2Q9UKV8 859 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 SATB2Q9UPW6 733 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 DOCK9Q9BZ29 2069 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 RP1P56715 2156 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 MED13Q9UHV7 2174 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 LY6G6EA0A0G2JKS1 128 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 TLR4O00206 839 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 NOBOXO60393 691 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 WFS1O76024 890 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 KLKB1P03952 638 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 CD38P28907 300 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZNF131P52739 623 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 GALCP54803 685 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 RIPPLY3P57055 190 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 GTF2BQ00403 316 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 SKIDA1Q1XH10 827 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 DIEXFQ68CQ4 756 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 TREML4Q6UXN2 200 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 PAQR9Q6ZVX9 377 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 NT5DC4Q86YG4 428 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 NUP93Q8N1F7 819 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 LIN37Q96GY3 246 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 CALR3Q96L12 384 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 CCNL2Q96S94 520 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 PLIN2Q99541 437 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 MRPL45Q9BRJ2 306 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 DPEP3Q9H4B8 488 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 ERVMER34-1Q9H9K5 563 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 PRSS16Q9NQE7 514 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 GDF3Q9NR23 364 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 CYP46A1Q9Y6A2 500 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 U3KQA8 63 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 ADGRG4Q8IZF6 3080 aa9.34□□□□□ -0.91
TRAPPC9-212ENST00000521944 CELSR1Q9NYQ6 3014 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 A0A1B0GVM2 712 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 H0YCG3 227 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 CASC3O15234 703 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 YKT6O15498 198 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 TLR5O60602 858 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 JAK2O60674 1132 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 SDC3O75056 442 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 WARSP23381 471 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 ARRB1P49407 418 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZNF211Q13398 564 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 CLCA4Q14CN2 919 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 MAPRE1Q15691 268 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 ISXQ2M1V0 245 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 HYIQ5T013 277 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 NCEH1Q6PIU2 408 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 DPH6Q7L8W6 267 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 ZC3H3Q8IXZ2 948 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 NECAB1Q8N987 351 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 PDZD8Q8NEN9 1154 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 WASF1Q92558 559 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 REEP2Q9BRK0 252 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 GZF1Q9H116 711 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 OSBPL2Q9H1P3 480 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 SGK2Q9HBY8 427 aa9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 LARSQ9P2J5 1176 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-212ENST00000521944 FAM47DPA6NHR8 397 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 K7ENM7 598 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 MDM4O15151 490 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 ATP9BO43861 1147 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 IL18RAPO95256 599 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 PLA2G4BP0C869 781 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 PTPN1P18031 435 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 WT1P19544 449 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TOB1P50616 345 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 SLC5A3P53794 718 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 ASIC1P78348 528 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 RBP5P82980 135 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 PTSQ03393 145 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 ORC2Q13416 577 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TGIF1Q15583 401 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TBR1Q16650 682 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 C3orf38Q5JPI3 329 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TTC38Q5R3I4 469 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 KRT79Q5XKE5 535 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 SERPINA13PQ6UXR4 307 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 HS2ST1Q7LGA3 356 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 CLEC14AQ86T13 490 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 PTRH1Q86Y79 214 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 NSUN7Q8NE18 718 aaKnown RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 SGF29Q96ES7 293 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 ATXN7L3BQ96GX2 97 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 DEPDC7Q96QD5 511 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TM6SF1Q9BZW5 370 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 MTMR12Q9C0I1 747 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 MTG2Q9H4K7 406 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 AASDHPPTQ9NRN7 309 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 PDRG1Q9NUG6 133 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 UCKL1Q9NWZ5 548 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 TJP2Q9UDY2 1190 aa9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 PLEKHB1Q9UF11 243 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-212ENST00000521944 ITGA11Q9UKX5 1188 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms