RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 NFKBIEO00221 500 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 GLRA3O75311 464 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 DMC1Q14565 340 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 LGI2Q8N0V4 545 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 WNT8BQ93098 351 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.57■□□□□ 0.24
USP42-207ENST00000521713 RIPK3Q9Y572 518 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 C5orf58C9J3I9 102 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 C4BPBP20851 252 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 CNTFP26441 200 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 RAB14P61106 215 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 FOXD4Q12950 439 aaPredicted RBP16.57■□□□□ 0.24
USP42-207ENST00000521713 MYO1HQ8N1T3 1032 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 RIN3Q8TB24 985 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 YIPF2Q9BWQ6 316 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 HIPK3Q9H422 1215 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 SLC24A2Q9UI40 661 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 DERAQ9Y315 318 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 A0A0G2JLL6 359 aaPredicted RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 UNCXA6NJT0 531 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 ELNP15502 786 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 BMT2Q1RMZ1 405 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 HECTD3Q5T447 861 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 WDR59Q6PJI9 974 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 PRRT2Q7Z6L0 340 aaPredicted RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 PRKD2Q9BZL6 878 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 FAM153AQ9UHL3 310 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 HACD1B0YJ81 288 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 TM9SF1O15321 606 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 MAP3K13O43283 966 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 GLP2RO95838 553 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 USP17L7P0C7H9 530 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 ICAM3P32942 547 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 PLOD1Q02809 727 aaPredicted RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 KRT72Q14CN4 511 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 CHI3L2Q15782 390 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 CCDC85BQ15834 202 aaPredicted RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 TFAP2DQ7Z6R9 452 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 CNDP1Q96KN2 507 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 KCTD10Q9H3F6 313 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 ASTN1O14525 1302 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 FZD9O00144 591 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 KLRC4O43908 158 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 IGSF6O95976 241 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 PRKCIP41743 596 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP42-207ENST00000521713 CDH17Q12864 832 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 SH3BP5LQ7L8J4 393 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 FAR2Q96K12 515 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 KLHL25Q9H0H3 589 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 VAV3Q9UKW4 847 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 USP1O94782 785 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 ADRB2P07550 413 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 YBX3P16989 372 aaKnown RBP eCLIP16.56■□□□□ 0.246e-9■□□□□ 9.5
USP42-207ENST00000521713 ZACNQ401N2 412 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 DENND1BQ6P3S1 775 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 LUZP2Q86TE4 346 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 PALB2Q86YC2 1186 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 CCDC103Q8IW40 242 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
USP42-207ENST00000521713 DCDC2Q9UHG0 476 aa16.56■□□□□ 0.24
USP42-207ENST00000521713 DARSP14868 501 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 IGFBP4P22692 258 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 PSMA4P25789 261 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 DEPDC1Q5TB30 811 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
USP42-207ENST00000521713 CD99L2Q8TCZ2 262 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 IGFLR1Q9H665 355 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 CDV3Q9UKY7 258 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 KPNA4O00629 521 aaPredicted RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 CAND2O75155 1236 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 PTPN7P35236 360 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 AENQ8WTP8 325 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 STK32AQ8WU08 396 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 SRPK1Q96SB4 655 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 SHOC2Q9UQ13 582 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 PLIN4Q96Q06 1357 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 OR6C75A6NL08 312 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 CA12O43570 354 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 TSPAN3O60637 253 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 ERFP50548 548 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 TUSC3Q13454 348 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 C12orf56Q8IXR9 622 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 ZNF786Q8N393 782 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 B3GALNT2Q8NCR0 500 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 HTR3CQ8WXA8 447 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 EFCAB1Q9HAE3 211 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 LNPEPQ9UIQ6 1025 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 PCDHA3Q9Y5H8 950 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 FAM58BPP0C7Q3 252 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms