RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 DMRT3Q9NQL9 472 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 ERAP1Q9NZ08 941 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 PCDHGA2Q9Y5H1 932 aa6.59□□□□□ -1.35
PABPC1-216ENST00000520868 CENPVL1A0A0U1RR11 272 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 MBLAC1A4D2B0 266 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 RRN3P2A6NIE6 340 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 PER2O15055 1255 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 PLEKHA8P1O95397 391 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 STAG3L1P0CL83 205 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 RXRAP19793 462 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 AGXTP21549 392 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 CHMLP26374 656 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 KIF5BP33176 963 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 NRIP1P48552 1158 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 CHN2P52757 468 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 MTMR1Q13613 665 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 TMEM266Q2M3C6 531 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 HERC4Q5GLZ8 1057 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 SPOUT1Q5T280 376 aaKnown RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 DDX42Q86XP3 938 aaKnown RBP eCLIP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 RAB11FIP4Q86YS3 637 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 VRK3Q8IV63 474 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 MB21D2Q8IYB1 491 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 SRBD1Q8N5C6 995 aaKnown RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 CNTD1Q8N815 330 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 TRAPPC12Q8WVT3 735 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 P2RX5Q93086 422 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 PPP2R3CQ969Q6 453 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 CDHR1Q96JP9 859 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 MSLNLQ96KJ4 702 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 RPGRIP1Q96KN7 1286 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 PCYT2Q99447 389 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 MRI1Q9BV20 369 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 SPZ1Q9BXG8 430 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 FAM126AQ9BYI3 521 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 MANSC1Q9H8J5 431 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 FAM30AQ9NZY2 134 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 SEC63Q9UGP8 760 aaKnown RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 PADI3Q9ULW8 664 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 BARX2Q9UMQ3 279 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 PCDHA6Q9UN73 950 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 USP15Q9Y4E8 981 aaPredicted RBP6.58□□□□□ -1.36
PABPC1-216ENST00000520868 TRPV2Q9Y5S1 764 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 UBIAD1Q9Y5Z9 338 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 TRIOO75962 3097 aa6.58□□□□□ -1.36
PABPC1-216ENST00000520868 TMEM221A6NGB7 291 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 CCDC69A6NI79 296 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 M0QZ92 97 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 M0R296 226 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 ZNF185O15231 689 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 PRC1O43663 620 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 POMCP01189 267 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 SCG2P13521 617 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 DDX6P26196 483 aaKnown RBP eCLIP6.57□□□□□ -1.364e-63■■□□□ 13.7
PABPC1-216ENST00000520868 SMARCA1P28370 1054 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 RAP2BP61225 183 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 GUCY1B3Q02153 619 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 PLCB4Q15147 1175 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 TTC22Q5TAA0 569 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 AGAP9Q5VTM2 703 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 CASC1Q6TDU7 716 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 RHOT2Q8IXI1 618 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 CMTR2Q8IYT2 770 aaKnown RBP6.57□□□□□ -1.36
PABPC1-216ENST00000520868 CPEB3Q8NE35 698 aaKnown RBP6.57□□□□□ -1.36
PABPC1-216ENST00000520868 PRSS33Q8NF86 280 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 FBXO18Q8NFZ0 1043 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 CYP2W1Q8TAV3 490 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 RUFY2Q8WXA3 655 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 PGBD1Q96JS3 809 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 LZTS2Q9BRK4 669 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 FTHL17Q9BXU8 183 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 AZI2Q9H6S1 392 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 TLE6Q9H808 572 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 LY9Q9HBG7 655 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 SLC9A2Q9UBY0 812 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 AJAP1Q9UKB5 411 aaPredicted RBP6.57□□□□□ -1.36
PABPC1-216ENST00000520868 PACSIN3Q9UKS6 424 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 DNM3Q9UQ16 869 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 GINS2Q9Y248 185 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 PCDHB7Q9Y5E2 793 aa6.57□□□□□ -1.36
PABPC1-216ENST00000520868 SMIM35A0A1B0GVV1 85 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 LOC730098B7Z3J9 87 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 SH2B2O14492 632 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-216ENST00000520868 GPR32O75388 356 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 RPS6KA5O75582 802 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 GLP2RO95838 553 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 ARP10275 920 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 AVPR1BP47901 424 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 GNAQP50148 359 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 ACTR2P61160 394 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 COASYQ13057 564 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 FAM102BQ5T8I3 360 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 METRNLQ641Q3 311 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 MTHFD1LQ6UB35 978 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 HEATR3Q7Z4Q2 680 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 SUGP1Q8IWZ8 645 aaKnown RBP6.56□□□□□ -1.36
PABPC1-216ENST00000520868 SMRP1Q8NCR6 262 aa6.56□□□□□ -1.36
PABPC1-216ENST00000520868 MAP4K1Q92918 833 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms