RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 PGBD4Q96DM1 585 aa11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 CLPTM1LQ96KA5 538 aa11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 LGMNQ99538 433 aa11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 DDX43Q9NXZ2 648 aaKnown RBP11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 SNTG2Q9NY99 539 aa11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 FZD10Q9ULW2 581 aa11.65□□□□□ -0.54
NUDCD1-203ENST00000519607 CCDC189A1A4V9 331 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 H3BRB1 525 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 ITM2AO43736 263 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SIN3BO75182 1162 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 LYPLA1O75608 230 aaPredicted RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 GABBR2O75899 941 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CD4P01730 458 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 C6orf222P0C671 652 aaPredicted RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SPRP35270 261 aaPredicted RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 RPL34P49207 117 aaKnown RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SULT1E1P49888 294 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CACNA2D1P54289 1103 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CRADDP78560 199 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 PCLAFQ15004 111 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SOWAHAQ2M3V2 549 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CFAP157Q5JU67 520 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 NAIF1Q69YI7 327 aaPredicted RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 IZUMO2Q6UXV1 221 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 ADGRG6Q86SQ4 1221 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 ANKRD13AQ8IZ07 590 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CLEC4CQ8WTT0 213 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 JADE3Q92613 823 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 FAM149B1Q96BN6 582 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 P2RY11Q96G91 374 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SNX27Q96L92 541 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 TRAPPC9Q96Q05 1148 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SEPT10Q9P0V9 454 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 COPG2Q9UBF2 871 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 EMCNQ9ULC0 261 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 STAP1Q9ULZ2 295 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 UBQLN1Q9UMX0 589 aaKnown RBP11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CDY2AQ9Y6F7 541 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 CDY1Q9Y6F8 540 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 RPS6KL1Q9Y6S9 549 aa11.65□□□□□ -0.55
NUDCD1-203ENST00000519607 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.556e-6■■■■■ 59.7
NUDCD1-203ENST00000519607 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 A0A088AWK7 358 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ENO4A6NNW6 628 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 XPOTO43592 962 aaKnown RBP11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 TOP3BO95985 862 aaKnown RBP11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 GSRP00390 522 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 PROCP04070 461 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 PDGFRBP09619 1106 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF286BP0CG31 522 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 CCDC130P13994 396 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 VAV1P15498 845 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 CRABP2P29373 138 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 CPOXP36551 454 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ABCE1P61221 599 aaKnown RBP11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 DEUP1Q05D60 604 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ZBTB6Q15916 424 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 FBXO47Q5MNV8 452 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 C9orf57Q5W0N0 161 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 SLC30A9Q6PML9 568 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 CATSPER4Q7RTX7 472 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 FAM131BQ86XD5 332 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 C10orf107Q8IVU9 208 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 UNC5BQ8IZJ1 945 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF483Q8TF39 744 aaPredicted RBP11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ARNTL2Q8WYA1 636 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 GATA6Q92908 595 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 CERS2Q96G23 380 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 TNIP3Q96KP6 325 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF560Q96MR9 790 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 LRRC40Q9H9A6 602 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 VTA1Q9NP79 307 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 USP3Q9Y6I4 520 aa11.64□□□□□ -0.55
NUDCD1-203ENST00000519607 F5H423 210 aaPredicted RBP11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 CPA3P15088 417 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 NCF2P19878 526 aaPredicted RBP11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 ADORA2AP29274 412 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 PNPLA4P41247 253 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 GRIK4Q16099 956 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 PDPK2PQ6A1A2 396 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 OR52E8Q6IFG1 317 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 NOTUMQ6P988 496 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 PID1Q7Z2X4 250 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 SHCBP1Q8NEM2 672 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 APPL2Q8NEU8 664 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 RNF139Q8WU17 664 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 PPP2R3CQ969Q6 453 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 ZMAT2Q96NC0 199 aaKnown RBP11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 GBP5Q96PP8 586 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 FAM192AQ9GZU8 254 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 DPEP3Q9H4B8 488 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 BFARQ9NZS9 450 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 IGSF9Q9P2J2 1179 aa11.63□□□□□ -0.55
NUDCD1-203ENST00000519607 ASB3Q9Y575 518 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms