RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 KPNB1Q14974 876 aaKnown RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 SMAD1Q15797 465 aaKnown RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TIGD6Q17RP2 521 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 ADCK5Q3MIX3 580 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 GALNTL6Q49A17 601 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 AWAT1Q58HT5 328 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3GQ6DHY5 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3CQ6IPX1 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 ANO7Q6IWH7 933 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 DPY19L2P1Q6NXN4 242 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF66Q6ZN08 573 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 UBE2Q1Q7Z7E8 422 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 MOGAT3Q86VF5 341 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 UEVLDQ8IX04 471 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3Q8IZP1 549 aaPredicted RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 BCAS4Q8TDM0 211 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 NTN5Q8WTR8 489 aaPredicted RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 C5orf34Q96MH7 638 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 FAM167BQ9BTA0 163 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 EFHD1Q9BUP0 239 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TRIM2Q9C040 744 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 ABHD16BQ9H3Z7 469 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TAF1DQ9H5J8 278 aaPredicted RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 SFXN1Q9H9B4 322 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 PRDM16Q9HAZ2 1276 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 ASNSD1Q9NWL6 643 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 BAG5Q9UL15 447 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 RAB21Q9UL25 225 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 B3GNT3Q9Y2A9 372 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 GPR52Q9Y2T5 361 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 WDR17Q8IZU2 1322 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 LOC102724159A0A0B4J2E5 919 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 FAM90A20PA6NIJ5 464 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 RRHO14718 337 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 DSCR3O14972 297 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 HNRNPRO43390 633 aaKnown RBP4.15□□□□□ -1.75
VPS13B-207ENST00000518569 KAT7O95251 611 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 IDUAP35475 653 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 PCP4P48539 62 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 AARSP49588 968 aaKnown RBP eCLIP4.15□□□□□ -1.75
VPS13B-207ENST00000518569 ACTR2P61160 394 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 PWP2Q15269 919 aaKnown RBP4.15□□□□□ -1.75
VPS13B-207ENST00000518569 SEC23BQ15437 767 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 TMEM95Q3KNT9 176 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 RRAGAQ7L523 313 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 RASGRP2Q7LDG7 609 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 RFX6Q8HWS3 928 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 ANKRD18AQ8IVF6 992 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 FTSJ3Q8IY81 847 aaKnown RBP4.15□□□□□ -1.75
VPS13B-207ENST00000518569 OSR1Q8TAX0 266 aaPredicted RBP4.15□□□□□ -1.75
VPS13B-207ENST00000518569 MAP4K1Q92918 833 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 SCLT1Q96NL6 688 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 GPR78Q96P69 363 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 PIGSQ96S52 555 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 FAM118BQ9BPY3 351 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 HTATIP2Q9BUP3 242 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 LZTS1Q9Y250 596 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 PCDHGB3Q9Y5G1 929 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 DGKBQ9Y6T7 804 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 EMSYQ7Z589 1322 aa4.15□□□□□ -1.75
VPS13B-207ENST00000518569 CYP2D7A0A087X1C5 515 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 CGB1A6NKQ9 187 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 E7EVH7 732 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 HEXIM1O94992 359 aaKnown RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 PLAUP00749 431 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 TK1P04183 234 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 CELA2AP08217 269 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 RFPL3SP0C7P2 107 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 TGM2P21980 687 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 RPS6KB1P23443 525 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 SOX2P48431 317 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 RCAN1P53805 252 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 PRKAA2P54646 552 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 SLC37A1P57057 533 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 RNASELQ05823 741 aaKnown RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 CUL4BQ13620 913 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 ZNF268Q14587 947 aaPredicted RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 CEP78Q5JTW2 689 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 FBXO47Q5MNV8 452 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 MIS18BP1Q6P0N0 1132 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 RBM44Q6ZP01 1051 aaKnown RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 ANKS1BQ7Z6G8 1248 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 TFAP2DQ7Z6R9 452 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 SRRM1Q8IYB3 904 aaKnown RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 PTGR2Q8N8N7 351 aaPredicted RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 MYRIPQ8NFW9 859 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 GCC1Q96CN9 775 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 FCRL5Q96RD9 977 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 POLR3GLQ9BT43 218 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 CHMP4AQ9BY43 222 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 ITM2CQ9NQX7 267 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 RASSF1Q9NS23 344 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 LUZP4Q9P127 313 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 PCDHA10Q9Y5I2 948 aa4.14□□□□□ -1.75
VPS13B-207ENST00000518569 COPG1Q9Y678 874 aaKnown RBP4.14□□□□□ -1.75
VPS13B-207ENST00000518569 INPPL1O15357 1258 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 SEPT4O43236 478 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 BCAR3O75815 825 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 CNTN5O94779 1100 aa4.13□□□□□ -1.75
VPS13B-207ENST00000518569 CD63P08962 238 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms