RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SOX2P48431 317 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 PDE6CP51160 858 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 FUT6P51993 359 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 UCNP55089 124 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 MGAT2Q10469 447 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZBTB17Q13105 803 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 TARDBPQ13148 414 aaKnown RBP eCLIP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 GLIPR1L2Q4G1C9 344 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 MUM1L1Q5H9M0 696 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 SPDYCQ5MJ68 293 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ASPHD2Q6ICH7 369 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 PAQR6Q6TCH4 344 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 FAM180AQ6UWF9 173 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 CEACAM20Q6UY09 585 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 KYAT3Q6YP21 454 aaKnown RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 SPATC1Q76KD6 591 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 KCNMB4Q86W47 210 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 PDSS2Q86YH6 399 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 APLFQ8IW19 511 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ABRAQ8N0Z2 381 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 TPRX1Q8N7U7 411 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF610Q8N9Z0 462 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNRF4Q8WWF5 429 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 WDR77Q9BQA1 342 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 HTATIP2Q9BUP3 242 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 RAB11FIP5Q9BXF6 653 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 TTYH3Q9C0H2 523 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 SLITRK2Q9H156 845 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 GPR35Q9HC97 309 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 TLR8Q9NR97 1041 aaKnown RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 BARHL2Q9NY43 387 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 IKZF3Q9UKT9 509 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 LAMP3Q9UQV4 416 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 MRPS17Q9Y2R5 130 aaKnown RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF175Q9Y473 711 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 HELZ2Q9BYK8 2649 aaKnown RBP-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 FER1L4A9Z1Z3 1794 aa-0.5□□□□□ -2.49
RNU6-539P-201ENST00000516665 A0A1W2PQ67 120 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 LILRA5A6NI73 299 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 HNRNPCL2B2RXH8 293 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 KDM1AO60341 852 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 CPEP16870 476 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 CD53P19397 219 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 POU3F2P20265 443 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 LOXL3P58215 753 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 GPC5P78333 572 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 CKAP4Q07065 602 aaKnown RBP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 E2F2Q14209 437 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 DDR2Q16832 855 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 KRTAP6-3Q3LI67 103 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 EEF1AKMT2Q5JPI9 291 aaKnown RBP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 FHL5Q5TD97 284 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 ISM2Q6H9L7 571 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 MON1BQ7L1V2 547 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF654Q8IZM8 581 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 AOPEPQ8N6M6 819 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 EFHBQ8N7U6 833 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 C12orf76Q8N812 135 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 IFI44Q8TCB0 444 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 AKAP1Q92667 903 aaKnown RBP eCLIP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 CELF1Q92879 486 aaKnown RBP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 TINF2Q9BSI4 451 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 DHX36Q9H2U1 1008 aaKnown RBP-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 FGF22Q9HCT0 170 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 MGAT4CQ9UBM8 478 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZDHHC2Q9UIJ5 367 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 FZD4Q9ULV1 537 aa-0.51□□□□□ -2.49
RNU6-539P-201ENST00000516665 TNFSF12-TNFSF13A0A0A6YY99 330 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 SRRM5B3KS81 715 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 MS4A18H0YCH9 400 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 RHODO00212 210 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 KCNQ2O43526 872 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 SOX30O94993 753 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 NTSR2O95665 410 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 TPOP07202 933 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 GJB1P08034 283 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 FRMD6-AS1P0C7T7 363 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 TYK2P29597 1187 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 PGFP49763 221 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 NUDT6P53370 316 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 MLC1Q15049 377 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 DUSP6Q16828 381 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 C2orf83Q53S99 150 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 CCDC93Q567U6 631 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZC3H12BQ5HYM0 836 aaKnown RBP-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 FAM53AQ6NSI3 398 aaPredicted RBP-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZSCAN25Q6NSZ9 544 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 FRMD7Q6ZUT3 714 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 GPRIN3Q6ZVF9 776 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 SLC9B2Q86UD5 537 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 DSELQ8IZU8 1212 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 PGBD5Q8N414 524 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 DMBX1Q8NFW5 382 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 TRIM58Q8NG06 486 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 GRHL3Q8TE85 626 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 CHTF18Q8WVB6 975 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 FATE1Q969F0 183 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 OMA1Q96E52 524 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 WDYHV1Q96HA8 205 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMX3Q96JJ7 454 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms